Basic Information:

  VIRBase ID:  

VHID00232853

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-3p:  MIMAT0001583          MYCL:  NM_001033081     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-2-3p	MYCL
miRBase Accession/Entrez ID	MIMAT0001583	4610
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	bHLHe38//L-Myc//LMYC//MYCL1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MYCL	chr1:40361245-40361246(-) m6A 3'UTR       27773535 chr1:40361399-40361400(-) m6A 3'UTR       24209618//25456834//24981863//22608085 chr1:40361487-40361488(-) m6A 3'UTR       24209618//25456834//24981863//22608085 chr1:40361556-40361557(-) m6A 3'UTR       25456834//24981863//22608085 chr1:40361634-40361635(-) m6A 3'UTR       25456834//24981863//27371828//27773536//22608085 chr1:40361646-40361647(-) m6A 3'UTR       24284625//25456834//24981863//27371828//27773536//22608085 chr1:40361664-40361665(-) m6A 3'UTR       24284625//25456834//24981863//27371828//27773536//22608085 chr1:40361778-40361779(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr1:40361854-40361855(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22608085 chr1:40361879-40361880(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22608085 chr1:40362021-40362022(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr1:40362091-40362092(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr1:40362107-40362108(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr1:40362176-40362177(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr1:40362235-40362236(-) m6A 3'UTR       25456834//24981863//22608085 chr1:40362314-40362315(-) m6A 3'UTR       24209618//25456834//24981863//22608085 chr1:40362335-40362336(-) m6A 3'UTR       24209618//24981863//22608085 chr1:40362404-40362405(-) m6A 3'UTR       24284625//24209618//24981863//22608085 chr1:40362468-40362469(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr1:40362496-40362497(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr1:40362530-40362531(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr1:40362542-40362543(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr1:40362566-40362567(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr1:40362611-40362612(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22608085 chr1:40362864-40362865(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr1:40362872-40362873(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr1:40362934-40362935(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr1:40362943-40362944(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr1:40363007-40363008(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr1:40363103-40363104(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//22608085 chr1:40363221-40363222(-) m6A CDS       24284625//24209618//25456834//27371828//22608085 chr1:40363325-40363326(-) m6A CDS       27371828//22608085 chr1:40363557-40363558(-) m6A CDS       - chr1:40365306-40365307(-) m6A 3'UTR//intron       - chr1:40366237-40366238(-) m6A 3'UTR//intron       25456834 chr1:40366275-40366276(-) m6A 3'UTR//intron       25456834 chr1:40366284-40366285(-) m6A 3'UTR//intron       25456834//24981863 chr1:40366316-40366317(-) m6A 3'UTR//intron       25456834//24981863 chr1:40366332-40366333(-) m6A 3'UTR//intron       25456834//24981863 chr1:40366369-40366370(-) m6A 3'UTR//intron       25456834//24981863 chr1:40366603-40366604(-) m6A CDS//intron       25456834//27773536 chr1:40366649-40366650(-) m6A CDS       25456834//24981863//27773536 chr1:40366656-40366657(-) m6A CDS       25456834//24981863//27773536 chr1:40366717-40366718(-) m6A CDS       24209618//25456834//24981863//27773536//22608085 chr1:40366744-40366745(-) m6A CDS       24209618//25456834//24981863//27773536//22608085 chr1:40366852-40366853(-) m6A CDS       24209618//25456834//24981863//27773536//22608085 chr1:40366948-40366949(-) m6A CDS       24209618//25456834//27773536//22608085 chr1:40367023-40367024(-) m6A CDS       24209618//25456834//24981863//27773536//22608085 chr1:40367101-40367102(-) m6A CDS       24209618//25456834//24981863//27371828//27773536//22608085 chr1:40367107-40367108(-) m6A 5'UTR//CDS       24209618//25456834//24981863//27371828//27773536//22608085 chr1:40367170-40367171(-) m6A 5'UTR//intron       25456834//24981863//27371828//27773536//22608085 chr1:40367178-40367179(-) m6A 5'UTR//intron       25456834//24981863//27371828//27773536//22608085 chr1:40367247-40367248(-) m6A 5'UTR//intron       25456834//24981863//27773536//22608085 chr1:40367332-40367333(-) m6A 5'UTR//intron       25456834//27773536//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MYCL	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-US25-2-3p	Irinotecan       60838

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-2-3p
Interactor2: MYCL

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg