Detail Information

Basic Information:


  VIRBase ID:  

VHID00232702

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-3p:           IGFBP5:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-US25-2-3p IGFBP5
miRBase
Accession/Entrez ID		 MIMAT0001583 3488
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - IBP5

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR IGFBP5
chr2:217551334(-) A-I      intronic
chr2:217547704(-) A-I      intronic
chr2:217547927(-) A-I      intronic
chr2:217551225(-) A-I      intronic
chr2:217547859(-) A-I      intronic
chr2:217551522(-) A-I      intronic
chr2:217548068(-) A-I      intronic
chr2:217547797(-) A-I      intronic
chr2:217541843(-) A-I      intronic
chr2:217547816(-) A-I      intronic
chr2:217547922(-) A-I      intronic
chr2:217547785(-) A-I      intronic
chr2:217547900(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED IGFBP5
chr2:217538596(-) A-I exon 3'UTR    19478186

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase IGFBP5
chr2:217538080-217538081(-) m6A 3'UTR       25456834//27773536
chr2:217538096-217538097(-) m6A 3'UTR       25456834//27773536
chr2:217538121-217538122(-) m6A 3'UTR       25456834//27773536
chr2:217538127-217538128(-) m6A 3'UTR       25456834//27773536
chr2:217538193-217538194(-) m6A 3'UTR       24209618//25456834//27773536
chr2:217538348-217538349(-) m6A 3'UTR       24209618//27773536
chr2:217538355-217538356(-) m6A 3'UTR       24209618//27773536
chr2:217538362-217538363(-) m6A 3'UTR       24284625//24209618//27773536
chr2:217538567-217538568(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773536//22608085
chr2:217538576-217538577(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773536//22608085
chr2:217538652-217538653(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773536//22608085
chr2:217538658-217538659(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr2:217538690-217538691(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr2:217538775-217538776(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr2:217538786-217538787(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr2:217538819-217538820(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr2:217538853-217538854(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr2:217538865-217538866(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr2:217538974-217538975(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr2:217539015-217539016(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr2:217539101-217539102(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773536//22608085
chr2:217539128-217539129(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773536//22608085
chr2:217539142-217539143(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773536//22608085
chr2:217539147-217539148(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773536//22608085
chr2:217539175-217539176(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773536//22608085
chr2:217539191-217539192(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773536//22608085
chr2:217539263-217539264(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773536//22608085
chr2:217539307-217539308(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773536//22608085
chr2:217539324-217539325(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773536//22608085
chr2:217539339-217539340(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773536//22608085
chr2:217539426-217539427(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773536//22608085
chr2:217539481-217539482(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773536//22608085
chr2:217539569-217539570(-) m6A 3'UTR       24209618//25456834//24981863//27773536//22608085
chr2:217539609-217539610(-) m6A 3'UTR       24209618//25456834//24981863//27773536//22608085
chr2:217539614-217539615(-) m6A 3'UTR       24209618//24981863//22608085
chr2:217539635-217539636(-) m6A 3'UTR       24209618//24981863//22608085
chr2:217539668-217539669(-) m6A 3'UTR       24209618//24981863//22608085
chr2:217539893-217539894(-) m6A 3'UTR       24209618//24981863
chr2:217539936-217539937(-) m6A 3'UTR       24981863
chr2:217540051-217540052(-) m6A 3'UTR       -
chr2:217540125-217540126(-) m6A 3'UTR       -
chr2:217540150-217540151(-) m6A 3'UTR       -
chr2:217540292-217540293(-) m6A 3'UTR       -
chr2:217540872-217540873(-) m6A 3'UTR       24981863
chr2:217540880-217540881(-) m6A 3'UTR       24981863
chr2:217540888-217540889(-) m6A 3'UTR       24981863
chr2:217540929-217540930(-) m6A 3'UTR       24981863
chr2:217540939-217540940(-) m6A 3'UTR       24981863
chr2:217541087-217541088(-) m6A 3'UTR       24209618//24981863//22608085
chr2:217541099-217541100(-) m6A 3'UTR       24209618//24981863//22608085
chr2:217541120-217541121(-) m6A 3'UTR       24209618//24981863//22608085
chr2:217541216-217541217(-) m6A 3'UTR       24209618//24981863//22608085
chr2:217541263-217541264(-) m6A 3'UTR       24209618//25456834//24981863//22608085
chr2:217541331-217541332(-) m6A 3'UTR       24209618//24981863//22608085
chr2:217541338-217541339(-) m6A 3'UTR       24209618//24981863//22608085
chr2:217541513-217541514(-) m6A CDS       24209618//27773536
chr2:217541558-217541559(-) m6A CDS       24209618//27773536
chr2:217541599-217541600(-) m6A CDS       27773536
chr2:217542939-217542940(-) m6A CDS       27773536
chr2:217543484-217543485(-) m6A exon//intron       27773536
chr2:217543510-217543511(-) m6A exon//intron       27773536
chr2:217543587-217543588(-) m6A CDS//exon       27773536
chr2:217543627-217543628(-) m6A CDS//exon       27773536
chr2:217543675-217543676(-) m6A CDS//exon       27773536
chr2:217543719-217543720(-) m6A CDS//exon       27773536
chr2:217543748-217543749(-) m6A CDS//exon       27773536
chr2:217543795-217543796(-) m6A CDS//exon       27773536
chr2:217543875-217543876(-) m6A CDS//intron       27773536
chr2:217543914-217543915(-) m6A CDS//intron       27773536
chr2:217560139-217560140(-) m6A 5'UTR       24981863
chr2:217560151-217560152(-) m6A 5'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate IGFBP5
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Ribosome HEK-293 cells     22199352

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hcmv-miR-US25-2-3p
Irinotecan       60838

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-US25-2-3p
Interactor2: IGFBP5

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//Rep//Targetscan
Support Database RepTar//VmiReg

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