Detail Information

Basic Information:


  VIRBase ID:  

VHID00231947

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-5p:           ZNF827:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-US25-2-5p ZNF827
miRBase
Accession/Entrez ID		 MIMAT0001582 152485
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ZNF827
chr4:146794282(-) A-I      intronic
chr4:146819245(-) A-I      intronic
chr4:146821647(-) A-I      intronic
chr4:146836547(-) A-I      intronic
chr4:146836560(-) A-I      intronic
chr4:146848554(-) A-I      intronic
chr4:146848553(-) A-I      intronic
chr4:146848521(-) A-I      intronic
chr4:146848517(-) A-I      intronic
chr4:146848564(-) A-I      intronic
chr4:146848556(-) A-I      intronic
chr4:146771426(-) A-I      intronic
chr4:146771381(-) A-I      intronic
chr4:146771378(-) A-I      intronic
chr4:146771365(-) A-I      intronic
chr4:146853314(-) A-I      intronic
chr4:146691339(-) A-I      intronic
chr4:146691364(-) A-I      intronic
chr4:146699424(-) A-I      intronic
chr4:146701126(-) A-I      intronic
chr4:146715667(-) A-I      intronic
chr4:146848591(-) A-I      intronic
chr4:146848603(-) A-I      intronic
chr4:146715671(-) A-I      intronic
chr4:146716422(-) A-I      intronic
chr4:146716527(-) A-I      intronic
chr4:146716575(-) A-I      intronic
chr4:146719583(-) A-I      intronic
chr4:146719633(-) A-I      intronic
chr4:146719638(-) A-I      intronic
chr4:146733359(-) A-I      intronic
chr4:146774623(-) A-I      intronic
chr4:146774860(-) A-I      intronic
chr4:146774995(-) A-I      intronic
chr4:146775005(-) A-I      intronic
chr4:146775007(-) A-I      intronic
chr4:146775030(-) A-I      intronic
chr4:146775035(-) A-I      intronic
chr4:146775071(-) A-I      intronic
chr4:146777194(-) A-I      intronic
chr4:146777223(-) A-I      intronic
chr4:146777235(-) A-I      intronic
chr4:146777243(-) A-I      intronic
chr4:146777292(-) A-I      intronic
chr4:146777315(-) A-I      intronic
chr4:146777340(-) A-I      intronic
chr4:146777366(-) A-I      intronic
chr4:146779622(-) A-I      intronic
chr4:146779645(-) A-I      intronic
chr4:146779670(-) A-I      intronic
chr4:146779707(-) A-I      intronic
chr4:146779711(-) A-I      intronic
chr4:146779750(-) A-I      intronic
chr4:146785102(-) A-I      intronic
chr4:146785111(-) A-I      intronic
chr4:146785180(-) A-I      intronic
chr4:146785183(-) A-I      intronic
chr4:146771434(-) A-I      intronic
chr4:146733848(-) A-I      intronic
chr4:146774637(-) A-I      intronic
chr4:146793932(-) A-I      intronic
chr4:146794292(-) A-I      intronic
chr4:146779699(-) A-I      intronic
chr4:146730097(-) A-I      intronic
chr4:146717887(-) A-I      intronic
chr4:146771394(-) A-I      intronic
chr4:146736017(-) A-I      intronic
chr4:146779734(-) A-I      intronic
chr4:146737301(-) A-I      intronic
chr4:146779573(-) A-I      intronic
chr4:146733198(-) A-I      intronic
chr4:146771435(-) A-I      intronic
chr4:146737297(-) A-I      intronic
chr4:146777284(-) A-I      intronic
chr4:146810778(-) A-I      intronic
chr4:146799680(-) A-I      intronic
chr4:146733818(-) A-I      intronic
chr4:146721638(-) A-I      intronic
chr4:146717933(-) A-I      intronic
chr4:146794284(-) A-I      intronic
chr4:146689927(-) A-I      intronic
chr4:146716438(-) A-I      intronic
chr4:146819119(-) A-I      intronic
chr4:146716437(-) A-I      intronic
chr4:146793794(-) A-I      intronic
chr4:146689972(-) A-I      intronic
chr4:146733765(-) A-I      intronic
chr4:146779659(-) A-I      intronic
chr4:146771260(-) A-I      intronic
chr4:146794216(-) A-I      intronic
chr4:146701208(-) A-I      intronic
chr4:146785095(-) A-I      intronic
chr4:146716354(-) A-I      intronic
chr4:146730199(-) A-I      intronic
chr4:146733205(-) A-I      intronic
chr4:146793915(-) A-I      intronic
chr4:146779694(-) A-I      intronic
chr4:146721673(-) A-I      intronic
chr4:146699432(-) A-I      intronic
chr4:146721622(-) A-I      intronic
chr4:146733785(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ZNF827
chr4:146841843(-) T-C intron -    22484847
chr4:146847231(-) A-G intron -    22484847
chr4:146847232(-) A-G intron -    22484847
chr4:146699432(-) A-G intron -    22484847
chr4:146715673(-) A-G intron -    22484847
chr4:146715717(-) A-G intron -    22484847
chr4:146716437(-) A-G intron -    22484847
chr4:146716482(-) A-G intron -    22484847
chr4:146716488(-) A-G intron -    22484847
chr4:146717980(-) C-T intron -    22484847
chr4:146735919(-) A-T intron -    22484847
chr4:146768313(-) A-T intron -    22484847
chr4:146771355(-) A-G intron -    22484847
chr4:146771434(-) A-G intron -    22484847
chr4:146771435(-) A-G intron -    22484847
chr4:146774637(-) A-G intron -    22484847
chr4:146774726(-) A-G intron -    22484847
chr4:146777284(-) A-G intron -    22484847
chr4:146779527(-) A-G intron -    22484847
chr4:146779659(-) A-G intron -    22484847
chr4:146779672(-) A-G intron -    22484847
chr4:146779694(-) A-G intron -    22484847
chr4:146779699(-) A-G intron -    22484847
chr4:146779734(-) A-G intron -    22484847
chr4:146785095(-) A-G intron -    22484847
chr4:146793794(-) A-G intron -    22484847
chr4:146793849(-) A-G intron -    22484847
chr4:146793915(-) A-G intron -    22484847
chr4:146793932(-) A-G intron -    22484847
chr4:146794216(-) A-G intron -    22484847
chr4:146794226(-) A-G intron -    22484847
chr4:146794284(-) A-G intron -    22484847
chr4:146794292(-) A-G intron -    22484847
chr4:146794362(-) A-G intron -    22484847
chr4:146819119(-) A-G intron -    22484847
chr4:146853708(-) T-A intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ZNF827
chr4:146679493-146679494(-) m6A 3'UTR       27773535
chr4:146679544-146679545(-) m6A 3'UTR       27773535
chr4:146679572-146679573(-) m6A 3'UTR       27773535
chr4:146680089-146680090(-) m6A 3'UTR       27773535
chr4:146681111-146681112(-) m6A 3'UTR       24981863//27773535
chr4:146681146-146681147(-) m6A 3'UTR       24981863//27773535
chr4:146681242-146681243(-) m6A 3'UTR       24981863
chr4:146681595-146681596(-) m6A 3'UTR       -
chr4:146681801-146681802(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr4:146681818-146681819(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr4:146681826-146681827(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr4:146681858-146681859(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr4:146681864-146681865(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//22608085
chr4:146681872-146681873(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//22608085
chr4:146681890-146681891(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:146681897-146681898(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:146681905-146681906(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:146681938-146681939(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:146681957-146681958(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:146681981-146681982(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:146682010-146682011(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:146682048-146682049(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr4:146682096-146682097(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//22608085
chr4:146682199-146682200(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27371828//22608085
chr4:146682293-146682294(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr4:146682324-146682325(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr4:146682339-146682340(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr4:146682391-146682392(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr4:146682421-146682422(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr4:146682465-146682466(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr4:146682556-146682557(-) m6A 3'UTR//CDS       24284625//24981863
chr4:146682691-146682692(-) m6A 3'UTR//CDS       27773535
chr4:146684250-146684251(-) m6A 3'UTR//intron       27773535
chr4:146684267-146684268(-) m6A 3'UTR//CDS//intron       27773535
chr4:146685859-146685860(-) m6A exon//intron       27773535
chr4:146685881-146685882(-) m6A exon//intron       27773535
chr4:146685891-146685892(-) m6A exon//intron       27773535
chr4:146686875-146686876(-) m6A CDS//exon       27773535
chr4:146686883-146686884(-) m6A CDS//exon       27773535
chr4:146695681-146695682(-) m6A CDS//exon       27773535
chr4:146695755-146695756(-) m6A CDS       27773535
chr4:146744619-146744620(-) m6A CDS//exon       27773535
chr4:146744649-146744650(-) m6A CDS//exon       27773535
chr4:146744659-146744660(-) m6A CDS//exon       27773535
chr4:146767117-146767118(-) m6A CDS//exon       27773535
chr4:146767128-146767129(-) m6A CDS//exon       27773535
chr4:146770532-146770533(-) m6A CDS//exon       27773535
chr4:146770576-146770577(-) m6A CDS//exon       27773535
chr4:146806873-146806874(-) m6A CDS//exon//intron       -
chr4:146806921-146806922(-) m6A CDS//intron       24209618//25456834//24981863//22608085
chr4:146807001-146807002(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr4:146807048-146807049(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr4:146807078-146807079(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr4:146807093-146807094(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr4:146807164-146807165(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr4:146807195-146807196(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr4:146807229-146807230(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27371828//22608085
chr4:146807282-146807283(-) m6A CDS//exon       27773535//22608085
chr4:146813416-146813417(-) m6A CDS//exon       27773535
chr4:146823441-146823442(-) m6A CDS//intron       24209618//25456834//24981863//27773535//27773536
chr4:146823472-146823473(-) m6A CDS//intron       24209618//25456834//24981863//27773535//27773536
chr4:146823710-146823711(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085
chr4:146823719-146823720(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085
chr4:146823736-146823737(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085
chr4:146823768-146823769(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085
chr4:146823814-146823815(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085
chr4:146823876-146823877(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22608085
chr4:146823952-146823953(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27773536//22608085
chr4:146824011-146824012(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27773536//22608085
chr4:146824132-146824133(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr4:146824150-146824151(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr4:146824207-146824208(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr4:146824237-146824238(-) m6A CDS//intron       24209618//25456834//24981863//27773535//27773536//22608085
chr4:146824258-146824259(-) m6A CDS//intron       24209618//25456834//24981863//27773535//22608085
chr4:146824295-146824296(-) m6A CDS//intron       24209618//25456834//24981863//27773535//22608085
chr4:146824306-146824307(-) m6A CDS//intron       24209618//25456834//24981863//27773535//22608085
chr4:146824320-146824321(-) m6A CDS//intron       24209618//25456834//24981863//27773535//22608085
chr4:146859722-146859723(-) m6A 5'UTR       27773535
chr4:146859744-146859745(-) m6A 5'UTR       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hcmv-miR-US25-2-5p
Exosome Jurkat-derived T cell line (J77cl20)     21505438
ZNF827
Exosome Blood     -
Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-US25-2-5p
Interactor2: ZNF827

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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