Basic Information:

  VIRBase ID:  

VHID00231893

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-5p:  MIMAT0001582          LSMEM2:  NM_153215     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-2-5p	LSMEM2
miRBase Accession/Entrez ID	MIMAT0001582	132228
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C3orf45

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	LSMEM2	chr3:50322561(+) A-I      intronic chr3:50322642(+) A-I      intronic chr3:50322592(+) A-I      intronic chr3:50322603(+) A-I      intronic chr3:50322612(+) A-I      intronic chr3:50322613(+) A-I      intronic chr3:50322632(+) A-I      intronic chr3:50317703(+) A-I      intronic chr3:50322587(+) A-I      intronic chr3:50322585(+) A-I      intronic chr3:50322694(+) A-I      intronic chr3:50322656(+) A-I      intronic chr3:50318191(+) A-I      intronic chr3:50317381(+) A-I      intronic chr3:50317806(+) A-I      intronic chr3:50317795(+) A-I      intronic chr3:50317776(+) A-I      intronic chr3:50317769(+) A-I      intronic chr3:50317486(+) A-I      intronic chr3:50317387(+) A-I      intronic chr3:50320411(+) A-I      intronic chr3:50321109(+) A-I      intronic chr3:50321008(+) A-I      intronic chr3:50318206(+) A-I      intronic chr3:50318154(+) A-I      intronic chr3:50317542(+) A-I      intronic chr3:50317686(+) A-I      intronic chr3:50317566(+) A-I      intronic chr3:50317711(+) A-I      intronic chr3:50317503(+) A-I      intronic chr3:50317411(+) A-I      intronic chr3:50320362(+) A-I      intronic chr3:50317535(+) A-I      intronic chr3:50319077(+) A-I      intronic chr3:50322084(+) A-I      intronic chr3:50317360(+) A-I      intronic chr3:50320960(+) A-I      intronic chr3:50318271(+) A-I      intronic chr3:50320114(+) A-I      intronic chr3:50321123(+) A-I      intronic chr3:50320250(+) A-I      intronic chr3:50320091(+) A-I      intronic chr3:50317578(+) A-I      intronic chr3:50320911(+) A-I      intronic chr3:50318286(+) A-I      intronic chr3:50320240(+) A-I      intronic chr3:50320169(+) A-I      intronic chr3:50318298(+) A-I      intronic chr3:50320061(+) A-I      intronic chr3:50317333(+) A-I      intronic chr3:50322030(+) A-I      intronic chr3:50317480(+) A-I      intronic chr3:50320060(+) A-I      intronic chr3:50320062(+) A-I      intronic chr3:50317556(+) A-I      intronic chr3:50319133(+) A-I      intronic chr3:50322089(+) A-I      intronic chr3:50320561(+) A-I      intronic chr3:50318209(+) A-I      intronic chr3:50322911(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	LSMEM2	chr3:50325407-50325408(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr3:50325412-50325413(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr3:50325443-50325444(+) m6A 3'UTR       24284625//25456834//24981863//26404942//22575960//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-US25-2-5p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	LSMEM2	Exosome Blood     - Nucleolus K562 cells     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-2-5p
Interactor2: LSMEM2

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid
Support Database	RepTar//VmiReg