Detail Information

Basic Information:


  VIRBase ID:  

VHID00231840

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-5p:           HENMT1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-US25-2-5p HENMT1
miRBase
Accession/Entrez ID		 MIMAT0001582 113802
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - C1orf59//HEN1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR HENMT1
chr1:109192475(-) A-I      intronic
chr1:109199228(-) A-I      intronic
chr1:109195519(-) A-I      intronic
chr1:109195373(-) A-I      intronic
chr1:109192565(-) A-I      intronic
chr1:109195911(-) A-I      intronic
chr1:109200883(-) A-I      intronic
chr1:109192175(-) A-I      intronic
chr1:109200821(-) A-I      intronic
chr1:109192051(-) A-I      NonSyn:Gln->Arg
chr1:109195380(-) A-I      intronic
chr1:109192526(-) A-I      intronic
chr1:109192518(-) A-I      intronic
chr1:109200972(-) A-I      intronic
chr1:109192462(-) A-I      intronic
chr1:109195910(-) A-I      intronic
chr1:109201006(-) A-I      intronic
chr1:109195466(-) A-I      intronic
chr1:109192555(-) A-I      intronic
chr1:109200819(-) A-I      intronic
chr1:109192522(-) A-I      intronic
chr1:109201022(-) A-I      intronic
chr1:109192575(-) A-I      intronic
chr1:109192567(-) A-I      intronic
chr1:109192057(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED HENMT1
chr1:109195380(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase HENMT1
chr1:109191186-109191187(-) m6A 3'UTR       24284625//24209618
chr1:109191202-109191203(-) m6A CDS       24284625//24209618
chr1:109191311-109191312(-) m6A CDS       24284625//24209618//24981863//27371828
chr1:109191334-109191335(-) m6A CDS       24284625//24209618//24981863//27371828
chr1:109191386-109191387(-) m6A CDS       24284625//24209618//25456834//24981863//27371828
chr1:109191424-109191425(-) m6A CDS       24284625//24209618//25456834//24981863//27371828
chr1:109191461-109191462(-) m6A CDS       24284625//24209618//25456834//24981863//27371828
chr1:109191493-109191494(-) m6A CDS       24284625//24209618//25456834//24981863//27371828
chr1:109191565-109191566(-) m6A CDS//exon       24284625//24209618//24981863//27371828
chr1:109203601-109203602(-) m6A 5'UTR//exon//intron       24981863
chr1:109203881-109203882(-) m6A 5'UTR       27371828
chr1:109203895-109203896(-) m6A 5'UTR       27371828

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hcmv-miR-US25-2-5p
Exosome Jurkat-derived T cell line (J77cl20)     21505438
HENMT1
Exosome Blood     -
Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-US25-2-5p
Interactor2: HENMT1

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//RNAHybrid
Support Database RepTar//VmiReg

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