Basic Information:

  VIRBase ID:  

VHID00231722

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-5p:  MIMAT0001582          TSPAN10:  NM_031945     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-2-5p	TSPAN10
miRBase Accession/Entrez ID	MIMAT0001582	83882
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	OCSP

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TSPAN10	chr17:79604297-79604298(+) m6A 5'UTR//exon       24981863 chr17:79604648-79604649(+) m6A exon//intron       22608085 chr17:79604760-79604761(+) m6A exon//intron       22608085 chr17:79604783-79604784(+) m6A exon//intron       22608085 chr17:79604905-79604906(+) m6A exon//intron       25456834//22608085 chr17:79604949-79604950(+) m6A exon//intron       25456834//24981863//22608085 chr17:79605023-79605024(+) m6A exon//intron       25456834//22608085 chr17:79605031-79605032(+) m6A exon//intron       25456834//22608085 chr17:79609355-79609356(+) m6A CDS//exon       24981863 chr17:79609391-79609392(+) m6A 5'UTR//CDS//exon       24981863 chr17:79612336-79612337(+) m6A CDS//exon       - chr17:79612417-79612418(+) m6A CDS//exon       - chr17:79615345-79615346(+) m6A 3'UTR       - chr17:79615453-79615454(+) m6A 3'UTR       24981863 chr17:79615533-79615534(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-US25-2-5p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	TSPAN10	Exosome Blood     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-2-5p
Interactor2: TSPAN10

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg