Detail Information

Basic Information:


  VIRBase ID:  

VHID00231602

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-5p:           KLHL25:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-US25-2-5p KLHL25
miRBase
Accession/Entrez ID		 MIMAT0001582 64410
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - ENC-2//ENC2

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR KLHL25
chr15:86310284(-) A-I      intronic
chr15:86326834(-) A-I      intronic
chr15:86326693(-) A-I      intronic
chr15:86326538(-) A-I      intronic
chr15:86318397(-) A-I      intronic
chr15:86318375(-) A-I      intronic
chr15:86318372(-) A-I      intronic
chr15:86318301(-) A-I      intronic
chr15:86310612(-) A-I      intronic
chr15:86310606(-) A-I      intronic
chr15:86308994(-) A-I      intronic
chr15:86308977(-) A-I      intronic
chr15:86318272(-) A-I      intronic
chr15:86331169(-) A-I      intronic
chr15:86324994(-) A-I      intronic
chr15:86310509(-) A-I      intronic
chr15:86309031(-) A-I      intronic
chr15:86310425(-) A-I      intronic
chr15:86326521(-) A-I      intronic
chr15:86308600(-) A-I      intronic
chr15:86308941(-) A-I      intronic
chr15:86318205(-) A-I      intronic
chr15:86333609(-) A-I      intronic
chr15:86332723(-) A-I      intronic
chr15:86324820(-) A-I      intronic
chr15:86324777(-) A-I      intronic
chr15:86326860(-) A-I      intronic
chr15:86326398(-) A-I      intronic
chr15:86334482(-) A-I      intronic
chr15:86309016(-) A-I      intronic
chr15:86326446(-) A-I      intronic
chr15:86310333(-) A-I      intronic
chr15:86324945(-) A-I      intronic
chr15:86324344(-) A-I      intronic
chr15:86334492(-) A-I      intronic
chr15:86328463(-) A-I      intronic
chr15:86310360(-) A-I      intronic
chr15:86326726(-) A-I      intronic
chr15:86332752(-) A-I      intronic
chr15:86330638(-) A-I      intronic
chr15:86308774(-) A-I      intronic
chr15:86324939(-) A-I      intronic
chr15:86308775(-) A-I      intronic
chr15:86308794(-) A-I      intronic
chr15:86331211(-) A-I      intronic
chr15:86325010(-) A-I      intronic
chr15:86326871(-) A-I      intronic
chr15:86308951(-) A-I      intronic
chr15:86324942(-) A-I      intronic
chr15:86326407(-) A-I      intronic
chr15:86324349(-) A-I      intronic
chr15:86309000(-) A-I      intronic
chr15:86308700(-) A-I      intronic
chr15:86332740(-) A-I      intronic
chr15:86326760(-) A-I      intronic
chr15:86326495(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase KLHL25
chr15:86303000-86303001(-) m6A 3'UTR//exon       24284625
chr15:86303031-86303032(-) m6A 3'UTR//exon       24284625
chr15:86303049-86303050(-) m6A 3'UTR//exon       24284625
chr15:86303215-86303216(-) m6A 3'UTR//exon       24284625//24981863//27773535//27371828//22608085
chr15:86303223-86303224(-) m6A 3'UTR//exon       24284625//24981863//27773535//27371828//22608085
chr15:86303295-86303296(-) m6A 3'UTR//exon       24284625//24981863//27773535//27371828//27773536
chr15:86303306-86303307(-) m6A 3'UTR//exon       24284625//24981863//27773535//27371828//27773536
chr15:86303362-86303363(-) m6A 3'UTR//exon       24284625//24981863//27371828//27773536
chr15:86303373-86303374(-) m6A 3'UTR//exon       24284625//24981863//27371828//27773536
chr15:86303397-86303398(-) m6A 3'UTR//exon       24284625//27371828//27773536
chr15:86303415-86303416(-) m6A 3'UTR//exon       24284625//27371828//27773536
chr15:86303539-86303540(-) m6A 3'UTR//exon       24284625//27773536
chr15:86303583-86303584(-) m6A 3'UTR//exon       24284625
chr15:86303671-86303672(-) m6A 3'UTR//exon       24284625
chr15:86303679-86303680(-) m6A 3'UTR//exon       24284625
chr15:86303726-86303727(-) m6A 3'UTR//exon       24284625//27773535
chr15:86303748-86303749(-) m6A 3'UTR//exon       24284625//27773535
chr15:86303766-86303767(-) m6A 3'UTR//exon       24284625//27773535
chr15:86303787-86303788(-) m6A 3'UTR//exon       25456834//24981863//27773535//22608085
chr15:86303925-86303926(-) m6A 3'UTR//exon       24284625//25456834//24981863//27371828//27773536//22575960//22608085
chr15:86303967-86303968(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr15:86303992-86303993(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr15:86304004-86304005(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr15:86304027-86304028(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr15:86304241-86304242(-) m6A 3'UTR//exon       -
chr15:86304288-86304289(-) m6A exon//intron       -
chr15:86311344-86311345(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr15:86311374-86311375(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr15:86311381-86311382(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr15:86311396-86311397(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr15:86311473-86311474(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr15:86311498-86311499(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr15:86311632-86311633(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr15:86311671-86311672(-) m6A CDS//intron       24284625//24209618//24981863//27773535//27773536//22608085
chr15:86311687-86311688(-) m6A CDS//intron       24284625//24209618//22608085
chr15:86311805-86311806(-) m6A CDS//intron       24284625//24209618//24981863
chr15:86311856-86311857(-) m6A CDS//intron       25456834//24981863//22608085
chr15:86311878-86311879(-) m6A CDS//intron       25456834//24981863//22608085
chr15:86312131-86312132(-) m6A CDS//intron       24284625
chr15:86312431-86312432(-) m6A CDS//intron       25456834//24981863//27371828//27773536//22608085
chr15:86312457-86312458(-) m6A CDS//intron       25456834//24981863//27371828//27773536//22608085
chr15:86312469-86312470(-) m6A CDS//intron       25456834//24981863//27371828//27773536//22608085
chr15:86312490-86312491(-) m6A CDS//intron       25456834//24981863//27371828//27773536//22608085
chr15:86312613-86312614(-) m6A CDS//intron       24284625//24981863//27371828//27773536//22575960//22608085
chr15:86312733-86312734(-) m6A CDS//intron       24284625//24981863//27371828//27773536//22608085
chr15:86312769-86312770(-) m6A CDS//intron       24284625//24981863//27371828//22608085
chr15:86312952-86312953(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr15:86313019-86313020(-) m6A CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr15:86338151-86338152(-) m6A 5'UTR       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hcmv-miR-US25-2-5p
Exosome Jurkat-derived T cell line (J77cl20)     21505438
KLHL25
Exosome Blood     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-US25-2-5p
Interactor2: KLHL25

Evidence Support:


Prediction-Evidence miRanda//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

Starting a new search, please wait ...