Detail Information

Basic Information:


  VIRBase ID:  

VHID00231544

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-5p:           HEG1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-US25-2-5p HEG1
miRBase
Accession/Entrez ID		 MIMAT0001582 57493
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - HEG//MST112//MSTP112

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR HEG1
chr3:124726947(-) A-I      intronic
chr3:124726921(-) A-I      intronic
chr3:124726914(-) A-I      intronic
chr3:124709376(-) A-I      intronic
chr3:124709352(-) A-I      intronic
chr3:124709347(-) A-I      intronic
chr3:124709331(-) A-I      intronic
chr3:124699644(-) A-I      intronic
chr3:124699636(-) A-I      intronic
chr3:124699635(-) A-I      intronic
chr3:124698014(-) A-I      intronic
chr3:124698000(-) A-I      intronic
chr3:124698028(-) A-I      intronic
chr3:124697089(-) A-I      intronic
chr3:124705992(-) A-I      intronic
chr3:124737745(-) A-I      intronic
chr3:124754807(-) A-I      intronic
chr3:124737771(-) A-I      intronic
chr3:124737746(-) A-I      intronic
chr3:124736671(-) A-I      intronic
chr3:124736630(-) A-I      intronic
chr3:124736118(-) A-I      intronic
chr3:124736117(-) A-I      intronic
chr3:124735996(-) A-I      intronic
chr3:124735995(-) A-I      intronic
chr3:124727010(-) A-I      intronic
chr3:124726977(-) A-I      intronic
chr3:124726973(-) A-I      intronic
chr3:124726930(-) A-I      intronic
chr3:124726927(-) A-I      intronic
chr3:124714137(-) A-I      intronic
chr3:124713994(-) A-I      intronic
chr3:124713623(-) A-I      intronic
chr3:124713615(-) A-I      intronic
chr3:124713532(-) A-I      intronic
chr3:124713529(-) A-I      intronic
chr3:124713461(-) A-I      intronic
chr3:124713447(-) A-I      intronic
chr3:124713446(-) A-I      intronic
chr3:124706489(-) A-I      intronic
chr3:124706474(-) A-I      intronic
chr3:124705980(-) A-I      intronic
chr3:124705962(-) A-I      intronic
chr3:124705954(-) A-I      intronic
chr3:124705941(-) A-I      intronic
chr3:124704700(-) A-I      intronic
chr3:124704695(-) A-I      intronic
chr3:124704694(-) A-I      intronic
chr3:124703411(-) A-I      intronic
chr3:124703368(-) A-I      intronic
chr3:124703359(-) A-I      intronic
chr3:124703358(-) A-I      intronic
chr3:124702446(-) A-I      intronic
chr3:124702378(-) A-I      intronic
chr3:124700934(-) A-I      intronic
chr3:124700815(-) A-I      intronic
chr3:124700814(-) A-I      intronic
chr3:124700812(-) A-I      intronic
chr3:124700804(-) A-I      intronic
chr3:124699658(-) A-I      intronic
chr3:124699485(-) A-I      intronic
chr3:124699472(-) A-I      intronic
chr3:124699458(-) A-I      intronic
chr3:124698596(-) A-I      intronic
chr3:124698573(-) A-I      intronic
chr3:124697999(-) A-I      intronic
chr3:124697794(-) A-I      intronic
chr3:124697639(-) A-I      intronic
chr3:124697103(-) A-I      intronic
chr3:124727479(-) A-I      intronic
chr3:124699446(-) A-I      intronic
chr3:124704800(-) A-I      intronic
chr3:124705940(-) A-I      intronic
chr3:124698588(-) A-I      intronic
chr3:124703437(-) A-I      intronic
chr3:124705966(-) A-I      intronic
chr3:124726882(-) A-I      intronic
chr3:124737880(-) A-I      intronic
chr3:124702438(-) A-I      intronic
chr3:124714043(-) A-I      intronic
chr3:124727518(-) A-I      intronic
chr3:124736620(-) A-I      intronic
chr3:124713892(-) A-I      intronic
chr3:124707717(-) A-I      intronic
chr3:124707678(-) A-I      intronic
chr3:124727589(-) A-I      intronic
chr3:124714060(-) A-I      intronic
chr3:124713913(-) A-I      intronic
chr3:124736675(-) A-I      intronic
chr3:124705933(-) A-I      intronic
chr3:124706049(-) A-I      intronic
chr3:124706464(-) A-I      intronic
chr3:124736826(-) A-I      intronic
chr3:124726870(-) A-I      intronic
chr3:124765309(-) A-I      intronic
chr3:124727565(-) A-I      intronic
chr3:124714074(-) A-I      intronic
chr3:124697883(-) A-I      intronic
chr3:124707758(-) A-I      intronic
chr3:124736751(-) A-I      intronic
chr3:124709321(-) A-I      intronic
chr3:124714061(-) A-I      intronic
chr3:124698610(-) A-I      intronic
chr3:124698607(-) A-I      intronic
chr3:124704795(-) A-I      intronic
chr3:124704895(-) A-I      intronic
chr3:124700770(-) A-I      intronic
chr3:124704790(-) A-I      intronic
chr3:124705987(-) A-I      intronic
chr3:124753587(-) A-I      intronic
chr3:124706503(-) A-I      intronic
chr3:124726808(-) A-I      intronic
chr3:124706047(-) A-I      intronic
chr3:124727603(-) A-I      intronic
chr3:124713527(-) A-I      intronic
chr3:124713960(-) A-I      intronic
chr3:124726948(-) A-I      intronic
chr3:124726932(-) A-I      intronic
chr3:124704911(-) A-I      intronic
chr3:124698068(-) A-I      intronic
chr3:124704718(-) A-I      intronic
chr3:124699566(-) A-I      intronic
chr3:124707613(-) A-I      intronic
chr3:124713620(-) A-I      intronic
chr3:124714143(-) A-I      intronic
chr3:124707578(-) A-I      intronic
chr3:124705963(-) A-I      intronic
chr3:124753640(-) A-I      intronic
chr3:124707735(-) A-I      intronic
chr3:124704801(-) A-I      intronic
chr3:124714048(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED HEG1
chr3:124700095(-) C-T intron -    22484847
chr3:124700096(-) A-C intron -    22484847
chr3:124698588(-) A-G intron -    22484847
chr3:124698607(-) A-G intron -    22484847
chr3:124698610(-) A-G intron -    22484847
chr3:124702438(-) A-G intron -    22484847
chr3:124705933(-) A-G intron -    22484847
chr3:124705939(-) A-G intron -    22484847
chr3:124705940(-) A-G intron -    22484847
chr3:124705963(-) A-G intron -    22484847
chr3:124705987(-) A-G intron -    22484847
chr3:124706030(-) A-G intron -    22484847
chr3:124706049(-) A-G intron -    22484847
chr3:124707653(-) A-G intron -    22484847
chr3:124707717(-) A-G intron -    22484847
chr3:124713527(-) A-G intron -    22484847
chr3:124713620(-) A-G intron -    22484847
chr3:124713892(-) A-G intron -    22484847
chr3:124713913(-) A-G intron -    22484847
chr3:124713960(-) A-G intron -    22484847
chr3:124714043(-) A-G intron -    22484847
chr3:124714048(-) A-G intron -    22484847
chr3:124714060(-) A-G intron -    22484847
chr3:124714061(-) A-G intron -    22484847
chr3:124714136(-) A-G intron -    22484847
chr3:124714143(-) A-G intron -    22484847
chr3:124726776(-) G-A intron -    22484847
chr3:124726777(-) T-C intron -    22484847
chr3:124726808(-) A-G intron -    22484847
chr3:124726898(-) A-G intron -    22484847
chr3:124726902(-) A-G intron -    22484847
chr3:124726931(-) A-G intron -    22484847
chr3:124726932(-) A-G intron -    22484847
chr3:124727479(-) A-G intron -    22484847
chr3:124727510(-) A-G intron -    22484847
chr3:124727514(-) A-G intron -    22484847
chr3:124727518(-) A-G intron -    22484847
chr3:124727589(-) A-G intron -    22484847
chr3:124736675(-) A-G intron -    22484847
chr3:124736751(-) A-G intron -    22484847
chr3:124753587(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase HEG1
chr3:124684727-124684728(-) m6A 3'UTR       27773535
chr3:124684754-124684755(-) m6A 3'UTR       27773535
chr3:124685069-124685070(-) m6A 3'UTR       24981863
chr3:124685102-124685103(-) m6A 3'UTR       24981863
chr3:124685134-124685135(-) m6A 3'UTR       24981863
chr3:124685145-124685146(-) m6A 3'UTR       24981863
chr3:124686515-124686516(-) m6A 3'UTR       24284625//27773535
chr3:124686521-124686522(-) m6A 3'UTR       24284625//27773535
chr3:124686561-124686562(-) m6A 3'UTR       24284625//27773535
chr3:124686656-124686657(-) m6A 3'UTR       24284625
chr3:124686989-124686990(-) m6A 3'UTR       24284625//27773535//27371828
chr3:124687048-124687049(-) m6A 3'UTR       24284625//27773535
chr3:124687152-124687153(-) m6A 3'UTR       24284625
chr3:124687654-124687655(-) m6A 3'UTR       24284625
chr3:124687732-124687733(-) m6A 3'UTR       24284625
chr3:124687851-124687852(-) m6A 3'UTR       24284625//24209618//24981863//27773535
chr3:124687945-124687946(-) m6A 3'UTR       24284625//24209618//27773535
chr3:124688079-124688080(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr3:124688117-124688118(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr3:124688193-124688194(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085
chr3:124688212-124688213(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085
chr3:124688219-124688220(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085
chr3:124688352-124688353(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr3:124688363-124688364(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr3:124688444-124688445(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr3:124688587-124688588(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:124688642-124688643(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:124688735-124688736(-) m6A 3'UTR       24284625//24209618//24981863//27773535
chr3:124688756-124688757(-) m6A 3'UTR       24284625//24209618//24981863//27773535
chr3:124688932-124688933(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr3:124688987-124688988(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr3:124689074-124689075(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr3:124689106-124689107(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr3:124689174-124689175(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:124689188-124689189(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:124689196-124689197(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:124689321-124689322(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:124689336-124689337(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:124689369-124689370(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:124689434-124689435(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:124689449-124689450(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:124689477-124689478(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:124689505-124689506(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:124689549-124689550(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:124689585-124689586(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:124689606-124689607(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr3:124689621-124689622(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085
chr3:124689896-124689897(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085
chr3:124690854-124690855(-) m6A exon//intron       24284625
chr3:124690971-124690972(-) m6A exon//intron       24284625//24981863
chr3:124692605-124692606(-) m6A CDS       24284625
chr3:124692724-124692725(-) m6A CDS       24284625
chr3:124728646-124728647(-) m6A CDS//exon       27773535
chr3:124729347-124729348(-) m6A CDS//exon       27773535
chr3:124729380-124729381(-) m6A CDS//exon       27773535
chr3:124731543-124731544(-) m6A CDS       24284625//27773535
chr3:124731568-124731569(-) m6A CDS       24284625//24981863//27773535
chr3:124731586-124731587(-) m6A CDS       24284625//24981863//27773535
chr3:124731711-124731712(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//22575960
chr3:124731785-124731786(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//22575960
chr3:124731799-124731800(-) m6A CDS       24284625//24209618//24981863//28052920//27773535//22575960
chr3:124731877-124731878(-) m6A CDS       24284625//24209618//24981863//28052920//27773535
chr3:124731943-124731944(-) m6A CDS       24284625//24209618//24981863//28052920//27773535
chr3:124731987-124731988(-) m6A CDS       24284625//24209618//24981863//27773535
chr3:124732092-124732093(-) m6A CDS       24284625//24209618//24981863//27773535
chr3:124732099-124732100(-) m6A CDS       24284625//24209618//24981863//27773535
chr3:124732144-124732145(-) m6A CDS       24284625//24209618//24981863//27773535
chr3:124732165-124732166(-) m6A CDS       24284625//24209618//24981863//27773535
chr3:124732216-124732217(-) m6A CDS       24284625//24209618//24981863//27773535
chr3:124732473-124732474(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22608085
chr3:124732491-124732492(-) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085
chr3:124732606-124732607(-) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085
chr3:124732647-124732648(-) m6A CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085
chr3:124732686-124732687(-) m6A CDS//exon       24284625//24209618//24981863//27773535//22608085
chr3:124732764-124732765(-) m6A CDS//exon       24284625//24209618//24981863//27773535
chr3:124732783-124732784(-) m6A CDS//exon       24284625//24209618//24981863//27773535
chr3:124732790-124732791(-) m6A CDS//exon       24284625//24209618//24981863//27773535
chr3:124733640-124733641(-) m6A exon//intron       24284625//27773535
chr3:124733790-124733791(-) m6A exon//intron       24284625//25456834//24981863//27773535//27371828
chr3:124733795-124733796(-) m6A exon//intron       24284625//25456834//24981863//27773535//27371828
chr3:124733846-124733847(-) m6A exon//intron       24284625//25456834//24981863
chr3:124739736-124739737(-) m6A CDS       24284625
chr3:124739802-124739803(-) m6A CDS       24284625//24981863//22608085
chr3:124739821-124739822(-) m6A CDS       24284625//24981863//22608085
chr3:124739834-124739835(-) m6A CDS       24284625//24981863//22608085
chr3:124739905-124739906(-) m6A CDS       24284625//24981863
chr3:124739911-124739912(-) m6A CDS       24284625//24981863
chr3:124746059-124746060(-) m6A CDS       24284625
chr3:124746084-124746085(-) m6A CDS       24284625
chr3:124746115-124746116(-) m6A CDS       24284625
chr3:124746222-124746223(-) m6A CDS       24284625//25456834//24981863//27371828
chr3:124746255-124746256(-) m6A CDS       24284625//25456834//24981863
chr3:124746273-124746274(-) m6A CDS       24284625//25456834//24981863
chr3:124746285-124746286(-) m6A CDS       24284625//25456834//24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hcmv-miR-US25-2-5p
Exosome Jurkat-derived T cell line (J77cl20)     21505438
HEG1
Cytosol HeLa-S3 cells     -
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleus HeLa-S3 cells     -
Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-US25-2-5p
Interactor2: HEG1

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//Targetscan
Support Database RepTar//VmiReg

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