Basic Information:

  VIRBase ID:  

VHID00231532

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-5p:  MIMAT0001582          THAP11:  NM_020457     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-2-5p	THAP11
miRBase Accession/Entrez ID	MIMAT0001582	57215
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CTG-B43a//CTG-B45d//HRIHFB2206//RONIN

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	THAP11	chr16:67876509-67876510(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr16:67876667-67876668(+) m6A CDS       24284625//25456834//22608085 chr16:67876735-67876736(+) m6A CDS       24209618//27371828//22575960//22608085 chr16:67876880-67876881(+) m6A CDS       24284625//24981863//22575960//22608085 chr16:67876899-67876900(+) m6A CDS       24284625//24981863//22575960//22608085 chr16:67876950-67876951(+) m6A CDS       24284625//24981863//22575960//22608085 chr16:67877253-67877254(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr16:67877341-67877342(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:67877402-67877403(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:67877426-67877427(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:67877434-67877435(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:67877452-67877453(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:67877470-67877471(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:67877524-67877525(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr16:67877588-67877589(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr16:67877678-67877679(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr16:67877686-67877687(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr16:67877693-67877694(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr16:67877729-67877730(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr16:67877746-67877747(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr16:67877775-67877776(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr16:67877874-67877875(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr16:67877904-67877905(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr16:67877975-67877976(+) m6A 3'UTR       24284625//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-US25-2-5p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	THAP11	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-2-5p
Interactor2: THAP11

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg