Basic Information:

  VIRBase ID:  

VHID00231530

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-5p:  MIMAT0001582          ATP10A:  NM_024490     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-2-5p	ATP10A
miRBase Accession/Entrez ID	MIMAT0001582	57194
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ATP10C//ATPVA//ATPVC

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ATP10A	chr15:25998620(-) A-I      intronic chr15:25998616(-) A-I      intronic chr15:25998615(-) A-I      intronic chr15:25998608(-) A-I      intronic chr15:26080286(-) A-I      intronic chr15:26004947(-) A-I      intronic chr15:26004887(-) A-I      intronic chr15:25998602(-) A-I      intronic chr15:25998593(-) A-I      intronic chr15:26006504(-) A-I      intronic chr15:26080294(-) A-I      intronic chr15:26006507(-) A-I      intronic chr15:26007431(-) A-I      intronic chr15:26007435(-) A-I      intronic chr15:25998592(-) A-I      intronic chr15:26007440(-) A-I      intronic chr15:26007441(-) A-I      intronic chr15:26007446(-) A-I      intronic chr15:26007454(-) A-I      intronic chr15:26007442(-) A-I      intronic chr15:26007443(-) A-I      intronic chr15:26080291(-) A-I      intronic chr15:25998575(-) A-I      intronic chr15:25998574(-) A-I      intronic chr15:25998573(-) A-I      intronic chr15:25998570(-) A-I      intronic chr15:25998566(-) A-I      intronic chr15:26007468(-) A-I      intronic chr15:26007445(-) A-I      intronic chr15:26080297(-) A-I      intronic chr15:26007460(-) A-I      intronic chr15:26006489(-) A-I      intronic chr15:26006486(-) A-I      intronic chr15:25998577(-) A-I      intronic chr15:25992249(-) A-I      intronic chr15:26080336(-) A-I      intronic chr15:25993310(-) A-I      intronic chr15:25999523(-) A-I      intronic chr15:25977738(-) A-I      intronic chr15:25974449(-) A-I      intronic chr15:26014399(-) A-I      intronic chr15:26080331(-) A-I      intronic chr15:26014469(-) A-I      intronic chr15:26081352(-) A-I      intronic chr15:26078268(-) A-I      intronic chr15:25993382(-) A-I      intronic chr15:25999553(-) A-I      intronic chr15:26081066(-) A-I      intronic chr15:25993304(-) A-I      intronic chr15:25993388(-) A-I      intronic chr15:25994088(-) A-I      intronic chr15:26004787(-) A-I      intronic chr15:26032054(-) A-I      intronic chr15:26022862(-) A-I      intronic chr15:26004899(-) A-I      intronic chr15:26013913(-) A-I      intronic chr15:26080335(-) A-I      intronic chr15:25993289(-) A-I      intronic chr15:26001601(-) A-I      intronic chr15:26013909(-) A-I      intronic chr15:26007701(-) A-I      intronic chr15:26080193(-) A-I      intronic chr15:26004880(-) A-I      intronic chr15:25999016(-) A-I      intronic chr15:25992251(-) A-I      intronic chr15:26038146(-) A-I      intronic chr15:26081333(-) A-I      intronic chr15:26004736(-) A-I      intronic chr15:25994082(-) A-I      intronic chr15:25927138(-) A-I      intronic chr15:26004732(-) A-I      intronic chr15:26004770(-) A-I      intronic chr15:26081341(-) A-I      intronic chr15:26004920(-) A-I      intronic chr15:26051490(-) A-I      intronic chr15:26081369(-) A-I      intronic chr15:26004761(-) A-I      intronic chr15:26005924(-) A-I      intronic chr15:26004735(-) A-I      intronic chr15:26093560(-) A-I      intronic chr15:26078871(-) A-I      intronic chr15:26007821(-) A-I      intronic chr15:26093200(-) A-I      intronic chr15:25999115(-) A-I      intronic chr15:25993314(-) A-I      intronic chr15:26004847(-) A-I      intronic chr15:26081089(-) A-I      intronic chr15:25999445(-) A-I      intronic chr15:25999482(-) A-I      intronic chr15:26013774(-) A-I      intronic chr15:25999373(-) A-I      intronic chr15:26004768(-) A-I      intronic chr15:26006460(-) A-I      intronic chr15:26093030(-) A-I      intronic chr15:25998587(-) A-I      intronic chr15:26007678(-) A-I      intronic chr15:26023023(-) A-I      intronic chr15:26007964(-) A-I      intronic chr15:26016487(-) A-I      intronic chr15:26093052(-) A-I      intronic chr15:25977238(-) A-I      intronic chr15:25977141(-) A-I      intronic chr15:25993381(-) A-I      intronic chr15:25998417(-) A-I      intronic chr15:26007719(-) A-I      intronic chr15:25998392(-) A-I      intronic chr15:26004773(-) A-I      intronic chr15:25998547(-) A-I      intronic chr15:26078281(-) A-I      intronic chr15:26013949(-) A-I      intronic chr15:26022958(-) A-I      intronic chr15:26093051(-) A-I      intronic chr15:25999459(-) A-I      intronic chr15:25994123(-) A-I      intronic chr15:25971619(-) A-I      intronic chr15:26004915(-) A-I      intronic chr15:26005210(-) A-I      intronic chr15:26013763(-) A-I      intronic chr15:25974451(-) A-I      intronic chr15:26016499(-) A-I      intronic chr15:25999155(-) A-I      intronic chr15:26007717(-) A-I      intronic chr15:26013955(-) A-I      intronic chr15:26005186(-) A-I      intronic chr15:26005910(-) A-I      intronic chr15:26004845(-) A-I      intronic chr15:26005181(-) A-I      intronic chr15:26004731(-) A-I      intronic chr15:26004835(-) A-I      intronic chr15:25992323(-) A-I      intronic chr15:25992313(-) A-I      intronic chr15:26078267(-) A-I      intronic chr15:26004781(-) A-I      intronic chr15:26019478(-) A-I      intronic chr15:25999506(-) A-I      intronic chr15:25999465(-) A-I      intronic chr15:26014512(-) A-I      intronic chr15:26080411(-) A-I      intronic chr15:26004904(-) A-I      intronic chr15:25992433(-) A-I      intronic chr15:26004873(-) A-I      intronic chr15:25971685(-) A-I      intronic chr15:25977523(-) A-I      intronic chr15:26017180(-) A-I      intronic chr15:25977416(-) A-I      intronic chr15:26081093(-) A-I      intronic chr15:25994134(-) A-I      intronic chr15:25971622(-) A-I      intronic chr15:25978427(-) A-I      intronic chr15:26013957(-) A-I      intronic chr15:26017005(-) A-I      intronic chr15:26104779(-) A-I      intronic chr15:25994098(-) A-I      intronic chr15:26005941(-) A-I      intronic chr15:26013764(-) A-I      intronic chr15:26016472(-) A-I      intronic chr15:26078331(-) A-I      intronic chr15:25998438(-) A-I      intronic chr15:26004829(-) A-I      intronic chr15:26022914(-) A-I      intronic chr15:26080244(-) A-I      intronic chr15:25999179(-) A-I      intronic chr15:25971661(-) A-I      intronic chr15:25972009(-) A-I      intronic chr15:26080242(-) A-I      intronic chr15:25999429(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ATP10A	chr15:25922836-25922837(-) m6A 3'UTR       - chr15:25922873-25922874(-) m6A 3'UTR       - chr15:25922934-25922935(-) m6A 3'UTR       - chr15:25922976-25922977(-) m6A 3'UTR       - chr15:25923015-25923016(-) m6A 3'UTR       - chr15:25923070-25923071(-) m6A 3'UTR       - chr15:25923100-25923101(-) m6A 3'UTR       - chr15:25923127-25923128(-) m6A 3'UTR       - chr15:25923187-25923188(-) m6A 3'UTR       - chr15:25923215-25923216(-) m6A 3'UTR       - chr15:25923940-25923941(-) m6A 3'UTR       - chr15:25924005-25924006(-) m6A 3'UTR       24981863 chr15:25924112-25924113(-) m6A 3'UTR       24981863//27371828 chr15:25924122-25924123(-) m6A 3'UTR       24981863//27371828 chr15:25924212-25924213(-) m6A 3'UTR       - chr15:25924484-25924485(-) m6A 3'UTR       25456834//24981863//27371828 chr15:25924523-25924524(-) m6A 3'UTR//CDS       25456834//24981863//27371828 chr15:25924530-25924531(-) m6A 3'UTR//CDS       25456834//24981863//27371828 chr15:25924544-25924545(-) m6A 3'UTR//CDS       25456834//24981863//27371828 chr15:25924577-25924578(-) m6A 3'UTR//CDS       25456834//24981863//27371828 chr15:25924592-25924593(-) m6A 3'UTR//CDS       25456834//24981863//27371828 chr15:25924866-25924867(-) m6A 3'UTR//CDS       25456834//24981863//27371828 chr15:25924951-25924952(-) m6A 3'UTR//CDS       25456834//24981863//27371828 chr15:25924960-25924961(-) m6A 3'UTR//CDS       25456834//24981863//27371828 chr15:25924981-25924982(-) m6A 3'UTR//CDS       25456834//24981863//27371828 chr15:25924989-25924990(-) m6A 3'UTR//CDS       25456834//24981863//27371828 chr15:25925017-25925018(-) m6A 3'UTR//CDS       25456834//24981863//27371828 chr15:25954876-25954877(-) m6A intron       - chr15:25954960-25954961(-) m6A intron       - chr15:25955046-25955047(-) m6A intron       - chr15:25955820-25955821(-) m6A intron       - chr15:25955929-25955930(-) m6A intron       - chr15:25959140-25959141(-) m6A 3'UTR//CDS       27371828 chr15:25959341-25959342(-) m6A 3'UTR//CDS       27371828 chr15:25963515-25963516(-) m6A CDS       - chr15:25966881-25966882(-) m6A CDS       24981863 chr15:25966909-25966910(-) m6A CDS       24981863 chr15:25966916-25966917(-) m6A CDS       24981863 chr15:25966928-25966929(-) m6A CDS       24981863 chr15:25966959-25966960(-) m6A CDS       24981863 chr15:25966982-25966983(-) m6A CDS       24981863 chr15:26107321-26107322(-) m6A 3'UTR//exon//intron       27371828 chr15:26107337-26107338(-) m6A 3'UTR//intron       27371828 chr15:26107373-26107374(-) m6A 3'UTR//intron       27371828 chr15:26107387-26107388(-) m6A 3'UTR//intron       27371828 chr15:26107854-26107855(-) m6A CDS       - chr15:26107866-26107867(-) m6A CDS       - chr15:26108010-26108011(-) m6A CDS       27371828 chr15:26108047-26108048(-) m6A CDS       27371828 chr15:26108127-26108128(-) m6A CDS       27371828 chr15:26108221-26108222(-) m6A CDS       27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-US25-2-5p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	ATP10A	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-2-5p
Interactor2: ATP10A

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg