Basic Information:

  VIRBase ID:  

VHID00231300

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-5p:  MIMAT0001582          TANC2:  NM_025185     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-2-5p	TANC2
miRBase Accession/Entrez ID	MIMAT0001582	26115
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	IDDALDS//rols//ROLSA

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TANC2	chr17:61371687(+) A-I      intronic chr17:61486706(+) A-I      intronic chr17:61486672(+) A-I      intronic chr17:61455243(+) A-I      intronic chr17:61371651(+) A-I      intronic chr17:61486658(+) A-I      intronic chr17:61396806(+) A-I      intronic chr17:61424206(+) A-I      intronic chr17:61425260(+) A-I      intronic chr17:61419975(+) A-I      intronic chr17:61419990(+) A-I      intronic chr17:61422860(+) A-I      intronic chr17:61422869(+) A-I      intronic chr17:61451527(+) A-I      intronic chr17:61451539(+) A-I      intronic chr17:61486569(+) A-I      intronic chr17:61486602(+) A-I      intronic chr17:61486679(+) A-I      intronic chr17:61337912(+) A-I      intronic chr17:61276869(+) A-I      intronic chr17:61289975(+) A-I      intronic chr17:61289973(+) A-I      intronic chr17:61277702(+) A-I      intronic chr17:61488102(+) A-I      intronic chr17:61488172(+) A-I      intronic chr17:61486680(+) A-I      intronic chr17:61338022(+) A-I      intronic chr17:61338027(+) A-I      intronic chr17:61488083(+) A-I      intronic chr17:61338043(+) A-I      intronic chr17:61371342(+) A-I      intronic chr17:61488171(+) A-I      intronic chr17:61396775(+) A-I      intronic chr17:61486732(+) A-I      intronic chr17:61398416(+) A-I      intronic chr17:61488115(+) A-I      intronic chr17:61488107(+) A-I      intronic chr17:61398425(+) A-I      intronic chr17:61337911(+) A-I      intronic chr17:61338021(+) A-I      intronic chr17:61282212(+) A-I      intronic chr17:61385152(+) A-I      intronic chr17:61396895(+) A-I      intronic chr17:61297918(+) A-I      intronic chr17:61289978(+) A-I      intronic chr17:61448815(+) A-I      intronic chr17:61385150(+) A-I      intronic chr17:61453377(+) A-I      intronic chr17:61451588(+) A-I      intronic chr17:61451604(+) A-I      intronic chr17:61425189(+) A-I      intronic chr17:61424143(+) A-I      intronic chr17:61298648(+) A-I      intronic chr17:61451502(+) A-I      intronic chr17:61447679(+) A-I      intronic chr17:61451086(+) A-I      intronic chr17:61448779(+) A-I      intronic chr17:61453195(+) A-I      intronic chr17:61451467(+) A-I      intronic chr17:61275818(+) A-I      intronic chr17:61277573(+) A-I      intronic chr17:61295416(+) A-I      intronic chr17:61275839(+) A-I      intronic chr17:61451673(+) A-I      intronic chr17:61453369(+) A-I      intronic chr17:61322346(+) A-I      intronic chr17:61421011(+) A-I      intronic chr17:61451613(+) A-I      intronic chr17:61297407(+) A-I      intronic chr17:61284837(+) A-I      intronic chr17:61421046(+) A-I      intronic chr17:61339786(+) A-I      intronic chr17:61396934(+) A-I      intronic chr17:61453823(+) A-I      intronic chr17:61451177(+) A-I      intronic chr17:61384288(+) A-I      intronic chr17:61385148(+) A-I      intronic chr17:61405517(+) A-I      intronic chr17:61447216(+) A-I      intronic chr17:61447199(+) A-I      intronic chr17:61371265(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	TANC2	chr17:61097343(+) A-I intron -    15545495 chr17:61097388(+) A-I intron -    15545495 chr17:61097405(+) A-I intron -    15545495 chr17:61097414(+) A-I intron -    15545495 chr17:61097433(+) A-I intron -    15545495 chr17:61097453(+) A-I intron -    15545495 chr17:61097461(+) A-I intron -    15545495 chr17:61097469(+) A-I intron -    15545495 chr17:61097551(+) A-I intron -    15545495 chr17:61290045(+) A-I intron -    21960545 chr17:61295416(+) A-I intron -    21960545 chr17:61450389(+) A-I intron -    21960545

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TANC2	chr17:61391922-61391923(+) m6A CDS       - chr17:61391939-61391940(+) m6A CDS       - chr17:61391956-61391957(+) m6A CDS       24284625 chr17:61391992-61391993(+) m6A CDS       24284625 chr17:61392006-61392007(+) m6A CDS       24284625 chr17:61432210-61432211(+) m6A CDS       24981863//22608085 chr17:61432216-61432217(+) m6A CDS       24981863//22608085 chr17:61432294-61432295(+) m6A CDS       24284625//24981863//26404942//22608085 chr17:61432313-61432314(+) m6A CDS       24284625//24981863//26404942//22608085 chr17:61432332-61432333(+) m6A CDS       24284625//24981863//26404942//22608085 chr17:61432364-61432365(+) m6A CDS       24284625//24981863//26404942//22608085 chr17:61432630-61432631(+) m6A CDS//exon       24284625//24981863//22575960//22608085 chr17:61432660-61432661(+) m6A CDS//exon       24981863 chr17:61476238-61476239(+) Cm CDS       - chr17:61495714-61495715(+) m6A CDS//intron       - chr17:61497382-61497383(+) m6A CDS       24284625//24981863 chr17:61497431-61497432(+) m6A 3'UTR//CDS       24284625//24981863 chr17:61497461-61497462(+) m6A 3'UTR//CDS       24284625//24981863 chr17:61497530-61497531(+) m6A 3'UTR//CDS       24284625//24209618//24981863//22608085 chr17:61497550-61497551(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr17:61497593-61497594(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr17:61497627-61497628(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr17:61497694-61497695(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr17:61497779-61497780(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr17:61497826-61497827(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr17:61497911-61497912(+) m6A 3'UTR//CDS       24284625//24209618//24981863 chr17:61498291-61498292(+) m6A 3'UTR//CDS       24284625 chr17:61498482-61498483(+) m6A 3'UTR//CDS       24284625//24981863 chr17:61498538-61498539(+) m6A 3'UTR//CDS       24284625//24981863 chr17:61498601-61498602(+) m6A 3'UTR//CDS       24284625//24981863 chr17:61498631-61498632(+) m6A 3'UTR//CDS       24284625//24981863 chr17:61498781-61498782(+) m6A 3'UTR//CDS       24284625//24209618//24981863//22575960//22608085 chr17:61498866-61498867(+) m6A 3'UTR//CDS       24284625//24209618//24981863//22575960//22608085 chr17:61498896-61498897(+) m6A 3'UTR//CDS       24284625//24209618//24981863//22575960//22608085 chr17:61498905-61498906(+) m6A 3'UTR//CDS       24284625//24209618//24981863//22575960//22608085 chr17:61498941-61498942(+) m6A 3'UTR//CDS       24284625//24209618//24981863//22575960//22608085 chr17:61498963-61498964(+) m6A 3'UTR//CDS       24284625//24209618//24981863//22575960//22608085 chr17:61499058-61499059(+) m6A 3'UTR//CDS       24284625//24209618//24981863//26404942//22575960//22608085 chr17:61499140-61499141(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr17:61499196-61499197(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr17:61499224-61499225(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr17:61499251-61499252(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr17:61499268-61499269(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr17:61499282-61499283(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr17:61499291-61499292(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr17:61499337-61499338(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr17:61499501-61499502(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr17:61499603-61499604(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr17:61499629-61499630(+) m6A 3'UTR       24284625//24209618//24981863 chr17:61499716-61499717(+) m6A 3'UTR       24981863 chr17:61501032-61501033(+) Gm 3'UTR       - chr17:61501080-61501081(+) m6A 3'UTR       24981863 chr17:61501096-61501097(+) m6A 3'UTR       24981863 chr17:61501103-61501104(+) m6A 3'UTR       24981863 chr17:61501113-61501114(+) m6A 3'UTR       24981863 chr17:61501144-61501145(+) m6A 3'UTR       24981863 chr17:61501190-61501191(+) m6A 3'UTR       24981863 chr17:61501207-61501208(+) m6A 3'UTR       24981863 chr17:61501923-61501924(+) m6A 3'UTR       24981863 chr17:61502978-61502979(+) m6A 3'UTR       24284625//24981863//22608085 chr17:61503106-61503107(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr17:61503115-61503116(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr17:61503131-61503132(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr17:61503336-61503337(+) m6A 3'UTR       24284625//24981863 chr17:61503341-61503342(+) m6A 3'UTR       24284625//24981863 chr17:61503497-61503498(+) m6A 3'UTR       24284625//24209618 chr17:61503607-61503608(+) m6A 3'UTR       24284625//24209618//24981863//26404942//22575960//22608085 chr17:61503638-61503639(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr17:61503684-61503685(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr17:61503708-61503709(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr17:61503756-61503757(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr17:61503842-61503843(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr17:61503984-61503985(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr17:61504133-61504134(+) m6A 3'UTR       24284625//24981863//22608085 chr17:61504879-61504880(+) m6A 3'UTR       24284625//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-US25-2-5p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	TANC2	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-2-5p
Interactor2: TANC2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg