Basic Information:

  VIRBase ID:  

VHID00230681

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-5p:  MIMAT0001582          LY9:  NM_001033667     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-2-5p	LY9
miRBase Accession/Entrez ID	MIMAT0001582	4063
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CD229//hly9//mLY9//SLAMF3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	LY9	chr1:160773597(+) A-I      intronic chr1:160785302(+) A-I      intronic chr1:160773564(+) A-I      intronic chr1:160779849(+) A-I      intronic chr1:160779391(+) A-I      intronic chr1:160773619(+) A-I      intronic chr1:160772873(+) A-I      intronic chr1:160794650(+) A-I      intronic chr1:160794624(+) A-I      intronic chr1:160794628(+) A-I      intronic chr1:160782723(+) A-I      ncRNA chr1:160773536(+) A-I      intronic chr1:160779255(+) A-I      intronic chr1:160785357(+) A-I      intronic chr1:160785238(+) A-I      intronic chr1:160779835(+) A-I      intronic chr1:160785276(+) A-I      intronic chr1:160779878(+) A-I      intronic chr1:160779937(+) A-I      intronic chr1:160785303(+) A-I      intronic chr1:160785391(+) A-I      intronic chr1:160785246(+) A-I      intronic chr1:160779337(+) A-I      intronic chr1:160785379(+) A-I      intronic chr1:160779404(+) A-I      intronic chr1:160779858(+) A-I      intronic chr1:160785397(+) A-I      intronic chr1:160785360(+) A-I      intronic chr1:160779764(+) A-I      intronic chr1:160779734(+) A-I      intronic chr1:160785411(+) A-I      intronic chr1:160779388(+) A-I      intronic chr1:160779843(+) A-I      intronic chr1:160785456(+) A-I      3'UTR chr1:160785196(+) A-I      intronic chr1:160779335(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	LY9	chr1:160779734(+) A-I intron -    15342557 chr1:160779764(+) A-I intron -    15342557 chr1:160779835(+) A-I intron -    15342557 chr1:160779843(+) A-I intron -    15342557 chr1:160779858(+) A-I intron -    15342557 chr1:160779878(+) A-I intron -    15342557 chr1:160779937(+) A-I intron -    15342557 chr1:160782723(+) A-I intron -    15342557 chr1:160784869(+) A-I intron -    15342557 chr1:160784873(+) A-I intron -    15342557 chr1:160784898(+) A-I intron -    15342557 chr1:160784953(+) A-I intron -    15342557 chr1:160784968(+) A-I intron -    15342557 chr1:160785024(+) A-I intron -    15342557 chr1:160785086(+) A-I intron -    15342557 chr1:160779388(+) A-G intron -    22484847 chr1:160784869(+) A-G intron -    22484847 chr1:160784873(+) A-G intron -    22484847 chr1:160785010(+) A-G intron -    22484847 chr1:160785086(+) A-G intron -    22484847 chr1:160785196(+) A-G intron -    22484847 chr1:160785238(+) A-G intron -    22484847 chr1:160785276(+) A-G intron -    22484847 chr1:160785360(+) A-G intron -    22484847 chr1:160785379(+) A-G intron -    22484847 chr1:160785391(+) A-G intron -    22484847 chr1:160785397(+) A-G intron -    22484847 chr1:160785411(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	LY9	chr1:160766076-160766077(+) m6A CDS//exon       - chr1:160766915-160766916(+) m6A CDS//intron       - chr1:160766940-160766941(+) m6A CDS//intron       - chr1:160769417-160769418(+) m6A exon//intron       - chr1:160769543-160769544(+) m6A 3'UTR//CDS//exon       - chr1:160769563-160769564(+) m6A 3'UTR//CDS//exon       - chr1:160769620-160769621(+) m6A 3'UTR//CDS//exon       - chr1:160769632-160769633(+) m6A 3'UTR//CDS//exon       - chr1:160769740-160769741(+) m6A 3'UTR//CDS//exon       - chr1:160769818-160769819(+) m6A 3'UTR//CDS//exon       - chr1:160771949-160771950(+) m6A 3'UTR//intron       - chr1:160772034-160772035(+) m6A 3'UTR//intron       - chr1:160772061-160772062(+) m6A 3'UTR//intron       - chr1:160783476-160783477(+) m6A CDS//exon       - chr1:160783544-160783545(+) m6A CDS//exon       - chr1:160783555-160783556(+) m6A CDS//exon       - chr1:160797637-160797638(+) m6A 3'UTR       - chr1:160797662-160797663(+) m6A 3'UTR       - chr1:160797687-160797688(+) m6A 3'UTR       - chr1:160797766-160797767(+) m6A 3'UTR       - chr1:160797774-160797775(+) m6A 3'UTR       - chr1:160797791-160797792(+) m6A 3'UTR       - chr1:160797888-160797889(+) m6A 3'UTR       - chr1:160797916-160797917(+) m6A 3'UTR       - chr1:160797959-160797960(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-US25-2-5p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	LY9	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-2-5p
Interactor2: LY9

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg