Basic Information:

  VIRBase ID:  

VHID00230604

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US25-2-5p:  MIMAT0001582          GNA15:  NM_002068     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US25-2-5p	GNA15
miRBase Accession/Entrez ID	MIMAT0001582	2769
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GNA16

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	GNA15	chr19:3158418(+) A-I      intronic chr19:3161220(+) A-I      intronic chr19:3158260(+) A-I      intronic chr19:3138185(+) A-I      intronic chr19:3158248(+) A-I      intronic chr19:3138765(+) A-I      intronic chr19:3138729(+) A-I      intronic chr19:3158277(+) A-I      intronic chr19:3158283(+) A-I      intronic chr19:3158366(+) A-I      intronic chr19:3161880(+) A-I      intronic chr19:3161911(+) A-I      intronic chr19:3138209(+) A-I      intronic chr19:3138213(+) A-I      intronic chr19:3138698(+) A-I      intronic chr19:3138728(+) A-I      intronic chr19:3137659(+) A-I      intronic chr19:3142668(+) A-I      intronic chr19:3162318(+) A-I      intronic chr19:3145646(+) A-I      intronic chr19:3161131(+) A-I      intronic chr19:3162181(+) A-I      intronic chr19:3137461(+) A-I      intronic chr19:3139626(+) A-I      intronic chr19:3145455(+) A-I      intronic chr19:3147375(+) A-I      intronic chr19:3158349(+) A-I      intronic chr19:3139403(+) A-I      intronic chr19:3137669(+) A-I      intronic chr19:3143539(+) A-I      intronic chr19:3138176(+) A-I      intronic chr19:3161816(+) A-I      intronic chr19:3161082(+) A-I      intronic chr19:3161875(+) A-I      intronic chr19:3139083(+) A-I      intronic chr19:3158287(+) A-I      intronic chr19:3161053(+) A-I      intronic chr19:3137482(+) A-I      intronic chr19:3156701(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	GNA15	chr19:3162255(+) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GNA15	chr19:3136521-3136522(+) m6A CDS       - chr19:3136563-3136564(+) m6A CDS       - chr19:3146416-3146417(+) m6A 3'UTR//intron       - chr19:3146437-3146438(+) m6A 3'UTR//intron       - chr19:3146465-3146466(+) m6A 3'UTR//intron       - chr19:3146556-3146557(+) m6A 3'UTR//intron       - chr19:3148696-3148697(+) m6A 3'UTR//CDS       - chr19:3162832-3162833(+) m6A CDS       - chr19:3162934-3162935(+) m6A CDS       - chr19:3162943-3162944(+) m6A CDS       - chr19:3162973-3162974(+) m6A CDS       - chr19:3163080-3163081(+) m6A 3'UTR       - chr19:3163185-3163186(+) m6A 3'UTR       25456834 chr19:3163311-3163312(+) m6A 3'UTR       25456834 chr19:3163380-3163381(+) m6A 3'UTR       25456834 chr19:3163446-3163447(+) m6A 3'UTR       25456834 chr19:3163466-3163467(+) m6A 3'UTR       25456834 chr19:3163491-3163492(+) m6A 3'UTR       25456834 chr19:3163499-3163500(+) m6A 3'UTR       25456834 chr19:3163514-3163515(+) m6A 3'UTR       25456834 chr19:3163538-3163539(+) m6A 3'UTR       25456834 chr19:3163549-3163550(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-US25-2-5p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	GNA15	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US25-2-5p
Interactor2: GNA15

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg