Basic Information:

  VIRBase ID:  

VHID00230274

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US5-2-3p:  MIMAT0001580          C6orf120:  NM_001317342     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US5-2-3p	C6orf120
miRBase Accession/Entrez ID	MIMAT0001580	387263
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	C6orf120	chr6:170102415-170102416(+) m6A 5'UTR       24284625//25456834//24981863//22608085 chr6:170102431-170102432(+) m6A 5'UTR       24284625//25456834//24981863//22608085 chr6:170102455-170102456(+) m6A 5'UTR       24284625//25456834//24981863//22608085 chr6:170102476-170102477(+) m6A 5'UTR       24284625//25456834//24981863//22608085 chr6:170102712-170102713(+) m6A CDS       24284625//22608085 chr6:170102733-170102734(+) m6A CDS       24284625//22608085 chr6:170102914-170102915(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr6:170103106-170103107(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:170103158-170103159(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr6:170103195-170103196(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr6:170103345-170103346(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr6:170103365-170103366(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22608085 chr6:170103571-170103572(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr6:170103790-170103791(+) m6A 3'UTR       24981863//22608085 chr6:170104346-170104347(+) m6A 3'UTR       24981863//22608085 chr6:170104430-170104431(+) m6A 3'UTR       24981863//26404942//22608085 chr6:170104465-170104466(+) m6A 3'UTR       24284625//24981863//26404942//22608085 chr6:170104491-170104492(+) m6A 3'UTR       24284625//24981863//22608085 chr6:170104519-170104520(+) m6A 3'UTR       24284625//24981863//22608085 chr6:170104604-170104605(+) m6A 3'UTR       24284625//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	C6orf120	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US5-2-3p
Interactor2: C6orf120

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Targetscan
Support Database	RepTar//VmiReg