Basic Information:

  VIRBase ID:  

VHID00230060

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US5-2-3p:  MIMAT0001580          PLEKHG4B:  NM_052909     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US5-2-3p	PLEKHG4B
miRBase Accession/Entrez ID	MIMAT0001580	153478
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PLEKHG4B	chr5:145576(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PLEKHG4B	chr5:154265(+) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PLEKHG4B	chr5:140378-140379(+) m6A 5'UTR       25456834 chr5:140438-140439(+) m6A CDS       24284625//25456834 chr5:140477-140478(+) m6A CDS       24284625//25456834 chr5:140513-140514(+) m6A CDS       24284625//25456834//24981863 chr5:140521-140522(+) m6A CDS       24284625//25456834//24981863 chr5:140542-140543(+) m6A CDS       24284625//25456834//24981863 chr5:140554-140555(+) m6A CDS       24284625//25456834//24981863 chr5:140573-140574(+) m6A CDS       24284625//25456834//24981863 chr5:140584-140585(+) m6A CDS       24284625//25456834//24981863 chr5:140623-140624(+) m6A CDS       24284625//25456834//24981863 chr5:140647-140648(+) m6A CDS       24284625//25456834//24981863 chr5:140769-140770(+) m6A CDS       24284625//25456834 chr5:140782-140783(+) m6A CDS       24284625//25456834 chr5:140789-140790(+) m6A CDS       24284625//25456834 chr5:162032-162033(+) m6A CDS       25456834 chr5:162861-162862(+) m6A CDS       25456834 chr5:163034-163035(+) m6A CDS       25456834 chr5:163077-163078(+) m6A CDS       25456834 chr5:163176-163177(+) m6A CDS       24284625//25456834 chr5:163198-163199(+) m6A CDS       24284625//25456834 chr5:163246-163247(+) m6A CDS       24284625//25456834 chr5:163259-163260(+) m6A CDS       24284625//25456834 chr5:163290-163291(+) m6A CDS       24284625//25456834 chr5:163350-163351(+) m6A CDS       24284625//25456834 chr5:163382-163383(+) m6A CDS       24284625//25456834//24981863 chr5:163405-163406(+) m6A CDS       24284625//25456834//24981863 chr5:163476-163477(+) m6A CDS       24284625//25456834//24981863 chr5:163491-163492(+) m6A CDS       24284625//25456834//24981863 chr5:174117-174118(+) m6A CDS//exon       24284625 chr5:174164-174165(+) m6A CDS//exon       24284625 chr5:181697-181698(+) m6A CDS//exon       24284625 chr5:181702-181703(+) m6A CDS//exon       24284625 chr5:182199-182200(+) m6A CDS//exon       24284625 chr5:182362-182363(+) m6A CDS//exon       24284625//25456834//24981863 chr5:182475-182476(+) m6A 3'UTR//exon       24284625//25456834//24981863 chr5:182597-182598(+) m6A 3'UTR//exon       24284625//25456834//24981863 chr5:182617-182618(+) m6A 3'UTR//exon       24284625//25456834//24981863 chr5:182647-182648(+) m6A 3'UTR//exon       24284625//25456834//24981863 chr5:182671-182672(+) m6A 3'UTR//exon       24284625//25456834//24981863 chr5:182686-182687(+) m6A 3'UTR//exon       24284625//25456834//24981863 chr5:182697-182698(+) m6A 3'UTR//exon       24284625//25456834//24981863 chr5:182702-182703(+) m6A 3'UTR//exon       24284625//25456834//24981863 chr5:182712-182713(+) m6A 3'UTR       24284625//25456834//24981863 chr5:182717-182718(+) m6A 3'UTR       24284625//25456834//24981863 chr5:182724-182725(+) m6A 3'UTR       24284625//25456834//24981863 chr5:182739-182740(+) m6A 3'UTR       24284625//25456834//24981863 chr5:182746-182747(+) m6A 3'UTR       24284625//25456834//24981863 chr5:182763-182764(+) m6A 3'UTR       24284625//25456834//24981863 chr5:182780-182781(+) m6A 3'UTR       24284625//25456834//24981863 chr5:182817-182818(+) m6A 3'UTR       24284625//25456834//24981863 chr5:182900-182901(+) m6A 3'UTR       24284625//25456834 chr5:182960-182961(+) m6A 3'UTR       25456834 chr5:183017-183018(+) m6A 3'UTR       24284625//25456834 chr5:183056-183057(+) m6A 3'UTR       25456834//24981863 chr5:183093-183094(+) m6A 3'UTR       25456834//24981863 chr5:183098-183099(+) m6A 3'UTR       25456834//24981863 chr5:183117-183118(+) m6A 3'UTR       25456834//24981863 chr5:183126-183127(+) m6A 3'UTR       25456834//24981863 chr5:183167-183168(+) m6A 3'UTR       24284625//25456834 chr5:183172-183173(+) m6A 3'UTR       24284625//25456834 chr5:183191-183192(+) m6A 3'UTR       24284625//25456834 chr5:183200-183201(+) m6A 3'UTR       24284625//25456834 chr5:183272-183273(+) m6A 3'UTR       24284625//25456834 chr5:183592-183593(+) m6A 3'UTR       24981863 chr5:183653-183654(+) m6A 3'UTR       24981863 chr5:183841-183842(+) m6A 3'UTR       25456834 chr5:183894-183895(+) m6A 3'UTR       25456834//24981863 chr5:183900-183901(+) m6A 3'UTR       25456834//24981863 chr5:183922-183923(+) m6A 3'UTR       25456834//24981863 chr5:183943-183944(+) m6A 3'UTR       25456834 chr5:183984-183985(+) m6A 3'UTR       25456834 chr5:184003-184004(+) m6A 3'UTR       25456834 chr5:184017-184018(+) m6A 3'UTR       25456834 chr5:184460-184461(+) m6A 3'UTR       25456834 chr5:184558-184559(+) m6A 3'UTR       24284625//25456834//24981863 chr5:184617-184618(+) m6A 3'UTR       24284625//25456834//24981863 chr5:184637-184638(+) m6A 3'UTR       24284625//25456834//24981863 chr5:184660-184661(+) m6A 3'UTR       24284625 chr5:184935-184936(+) m6A 3'UTR       24981863 chr5:184956-184957(+) m6A 3'UTR       24981863 chr5:184966-184967(+) m6A 3'UTR       24981863 chr5:185011-185012(+) m6A 3'UTR       24981863 chr5:185204-185205(+) m6A 3'UTR       25456834 chr5:185282-185283(+) m6A 3'UTR       24284625//25456834//24981863 chr5:185302-185303(+) m6A 3'UTR       25456834//24981863 chr5:185316-185317(+) m6A 3'UTR       25456834//24981863 chr5:185345-185346(+) m6A 3'UTR       25456834//24981863 chr5:185380-185381(+) m6A 3'UTR       25456834//24981863 chr5:185451-185452(+) m6A 3'UTR       25456834 chr5:185666-185667(+) m6A 3'UTR       25456834 chr5:185682-185683(+) m6A 3'UTR       25456834 chr5:185902-185903(+) m6A 3'UTR       25456834 chr5:185924-185925(+) m6A 3'UTR       25456834 chr5:186672-186673(+) m6A 3'UTR       25456834 chr5:186737-186738(+) m6A 3'UTR       25456834 chr5:187031-187032(+) m6A 3'UTR       25456834 chr5:187102-187103(+) m6A 3'UTR       25456834 chr5:187130-187131(+) m6A 3'UTR       25456834 chr5:187141-187142(+) m6A 3'UTR       25456834 chr5:187183-187184(+) m6A 3'UTR       25456834 chr5:187315-187316(+) m6A 3'UTR       25456834 chr5:187352-187353(+) m6A 3'UTR       25456834 chr5:187419-187420(+) m6A 3'UTR       25456834 chr5:187554-187555(+) m6A 3'UTR       25456834 chr5:187563-187564(+) m6A 3'UTR       25456834 chr5:187607-187608(+) m6A 3'UTR       25456834 chr5:188185-188186(+) m6A 3'UTR       25456834 chr5:188338-188339(+) m6A 3'UTR       25456834 chr5:188392-188393(+) m6A 3'UTR       25456834 chr5:188451-188452(+) m6A 3'UTR       25456834 chr5:188486-188487(+) m6A 3'UTR       25456834 chr5:188562-188563(+) m6A 3'UTR       25456834 chr5:188707-188708(+) m6A 3'UTR       25456834 chr5:188739-188740(+) m6A 3'UTR       25456834 chr5:188744-188745(+) m6A 3'UTR       25456834 chr5:188765-188766(+) m6A 3'UTR       25456834 chr5:188840-188841(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PLEKHG4B	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US5-2-3p
Interactor2: PLEKHG4B

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg