Basic Information:

  VIRBase ID:  

VHID00229985

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US5-2-3p:  MIMAT0001580          UNC5D:  NM_001322818     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US5-2-3p	UNC5D
miRBase Accession/Entrez ID	MIMAT0001580	137970
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	PRO34692//Unc5h4

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	UNC5D	chr8:35150376(+) A-I      intronic chr8:35243034(+) A-I      intronic chr8:35243039(+) A-I      intronic chr8:35245704(+) A-I      intronic chr8:35245705(+) A-I      intronic chr8:35245726(+) A-I      intronic chr8:35245877(+) A-I      intronic chr8:35645222(+) A-I      intronic chr8:35470696(+) A-I      intronic chr8:35307070(+) A-I      intronic chr8:35244760(+) A-I      intronic chr8:35243064(+) A-I      intronic chr8:35191127(+) A-I      intronic chr8:35142134(+) A-I      intronic chr8:35142116(+) A-I      intronic chr8:35125096(+) A-I      intronic chr8:35125086(+) A-I      intronic chr8:35125083(+) A-I      intronic chr8:35125013(+) A-I      intronic chr8:35124988(+) A-I      intronic chr8:35124976(+) A-I      intronic chr8:35123225(+) A-I      intronic chr8:35121030(+) A-I      intronic chr8:35108152(+) A-I      intronic chr8:35108074(+) A-I      intronic chr8:35097571(+) A-I      intronic chr8:35097566(+) A-I      intronic chr8:35142166(+) A-I      intronic chr8:35643019(+) A-I      intronic chr8:35471206(+) A-I      intronic chr8:35470776(+) A-I      intronic chr8:35470729(+) A-I      intronic chr8:35142332(+) A-I      intronic chr8:35150364(+) A-I      intronic chr8:35553392(+) A-I      intronic chr8:35593768(+) A-I      intronic chr8:35102413(+) A-I      intronic chr8:35321686(+) A-I      intronic chr8:35137565(+) A-I      intronic chr8:35142256(+) A-I      intronic chr8:35245691(+) A-I      intronic chr8:35497362(+) A-I      intronic chr8:35102271(+) A-I      intronic chr8:35370401(+) A-I      intronic chr8:35228595(+) A-I      intronic chr8:35245672(+) A-I      intronic chr8:35150443(+) A-I      intronic chr8:35125037(+) A-I      intronic chr8:35569728(+) A-I      intronic chr8:35245839(+) A-I      intronic chr8:35496071(+) A-I      intronic chr8:35191062(+) A-I      intronic chr8:35435622(+) A-I      intronic chr8:35645205(+) A-I      intronic chr8:35254161(+) A-I      intronic chr8:35157855(+) A-I      intronic chr8:35496238(+) A-I      intronic chr8:35435671(+) A-I      intronic chr8:35593782(+) A-I      intronic chr8:35123267(+) A-I      intronic chr8:35370473(+) A-I      intronic chr8:35328067(+) A-I      intronic chr8:35428353(+) A-I      intronic chr8:35191272(+) A-I      intronic chr8:35191078(+) A-I      intronic chr8:35497505(+) A-I      intronic chr8:35497452(+) A-I      intronic chr8:35145274(+) A-I      intronic chr8:35370410(+) A-I      intronic chr8:35125217(+) A-I      intronic chr8:35440750(+) A-I      intronic chr8:35501133(+) A-I      intronic chr8:35125057(+) A-I      intronic chr8:35435623(+) A-I      intronic chr8:35125229(+) A-I      intronic chr8:35501000(+) A-I      intronic chr8:35434338(+) A-I      intronic chr8:35593905(+) A-I      intronic chr8:35370409(+) A-I      intronic chr8:35497445(+) A-I      intronic chr8:35435474(+) A-I      intronic chr8:35142287(+) A-I      intronic chr8:35192306(+) A-I      intronic chr8:35328065(+) A-I      intronic chr8:35191260(+) A-I      intronic chr8:35108254(+) A-I      intronic chr8:35640203(+) A-I      intronic chr8:35592381(+) A-I      intronic chr8:35190662(+) A-I      intronic chr8:35157711(+) A-I      intronic chr8:35435664(+) A-I      intronic chr8:35310013(+) A-I      intronic chr8:35137570(+) A-I      intronic chr8:35157815(+) A-I      intronic chr8:35142212(+) A-I      intronic chr8:35501015(+) A-I      intronic chr8:35157885(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	UNC5D	chr8:35245672(+) A-I intron -    15342557 chr8:35245691(+) A-I intron -    15342557 chr8:35245735(+) A-I intron -    15342557 chr8:35245743(+) A-I intron -    15342557 chr8:35245762(+) A-I intron -    15342557 chr8:35245832(+) A-I intron -    15342557 chr8:35245839(+) A-I intron -    15342557 chr8:35247259(+) A-I intron -    15342557

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	UNC5D	chr8:35583722-35583723(+) m6A CDS//exon       25456834 chr8:35583733-35583734(+) m6A CDS//exon       25456834 chr8:35583750-35583751(+) m6A CDS//exon       25456834 chr8:35583759-35583760(+) m6A CDS//exon       25456834 chr8:35583804-35583805(+) m6A CDS//exon       25456834 chr8:35583890-35583891(+) m6A CDS//exon       25456834//24981863 chr8:35583906-35583907(+) m6A CDS//exon       24981863 chr8:35631911-35631912(+) m6A CDS       24981863 chr8:35631958-35631959(+) m6A CDS       24981863 chr8:35631982-35631983(+) m6A CDS       24981863 chr8:35647926-35647927(+) m6A CDS       25456834//24981863 chr8:35648000-35648001(+) m6A CDS       25456834//24981863 chr8:35648011-35648012(+) m6A CDS       25456834//24981863 chr8:35648019-35648020(+) m6A CDS       25456834//24981863 chr8:35648074-35648075(+) m6A CDS       25456834//24981863 chr8:35648099-35648100(+) m6A 3'UTR       25456834//24981863 chr8:35648122-35648123(+) m6A 3'UTR       25456834//24981863 chr8:35648219-35648220(+) m6A 3'UTR       24981863 chr8:35651897-35651898(+) m6A 3'UTR       25456834//24981863 chr8:35653657-35653658(+) m6A 3'UTR       24981863 chr8:35653684-35653685(+) m6A 3'UTR       24981863 chr8:35653790-35653791(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	UNC5D	Chromatin K562 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US5-2-3p
Interactor2: UNC5D

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg