Basic Information:

  VIRBase ID:  

VHID00229620

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US5-2-3p:  MIMAT0001580          PERP:  NM_022121     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US5-2-3p	PERP
miRBase Accession/Entrez ID	MIMAT0001580	64065
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	dJ496H19.1//EKVP7//KCP1//KRTCAP1//OLMS2//PIGPC1//THW

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PERP	chr6:138424485(-) A-I      intronic chr6:138424424(-) A-I      intronic chr6:138424493(-) A-I      intronic chr6:138424462(-) A-I      intronic chr6:138424492(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PERP	chr6:138411123-138411124(-) m6A 3'UTR       27773535 chr6:138412128-138412129(-) m6A 3'UTR       26404942 chr6:138412153-138412154(-) m6A 3'UTR       26404942 chr6:138412290-138412291(-) m6A 3'UTR       26404942 chr6:138412381-138412382(-) m6A 3'UTR       26404942 chr6:138412398-138412399(-) m6A 3'UTR       26404942 chr6:138412408-138412409(-) m6A 3'UTR       26404942 chr6:138412692-138412693(-) m6A 3'UTR       26404942 chr6:138412739-138412740(-) m6A 3'UTR       26404942//22608085 chr6:138413066-138413067(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr6:138413097-138413098(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr6:138413120-138413121(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr6:138413135-138413136(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr6:138413354-138413355(-) m6A CDS       24284625//26404942//27773535//22575960 chr6:138417542-138417543(-) m6A CDS       24284625//27773535//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PERP	Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleus HCC cell line (HepG2)     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US5-2-3p
Interactor2: PERP

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg