Basic Information:

  VIRBase ID:  

VHID00229411

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US5-2-3p:  MIMAT0001580          DNAJC28:  NM_001320746     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US5-2-3p	DNAJC28
miRBase Accession/Entrez ID	MIMAT0001580	54943
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C21orf55//C21orf78

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DNAJC28	chr21:34860271(-) A-I      3'UTR chr21:34860277(-) A-I      3'UTR chr21:34862909(-) A-I      intronic chr21:34862898(-) A-I      intronic chr21:34860284(-) A-I      3'UTR chr21:34860289(-) A-I      3'UTR chr21:34862389(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DNAJC28	chr21:34860576-34860577(-) m6A CDS       27773535//22608085 chr21:34860604-34860605(-) m6A CDS       27773535//22608085 chr21:34860639-34860640(-) m6A CDS       24981863//27773535//22608085 chr21:34860661-34860662(-) m6A CDS       24981863//27773535//22608085 chr21:34860673-34860674(-) m6A CDS       24981863//27773535//22608085 chr21:34860777-34860778(-) m6A CDS       24981863//27773535//22608085 chr21:34860792-34860793(-) m6A CDS       24981863//27773535//22608085 chr21:34860819-34860820(-) m6A CDS       24981863//27773535//22608085 chr21:34860827-34860828(-) m6A CDS       24981863//27773535//22608085 chr21:34860860-34860861(-) m6A CDS       24284625//24981863//27773535//22608085 chr21:34860969-34860970(-) m6A CDS       24284625//24981863//27773535//22608085 chr21:34861025-34861026(-) m6A CDS       24284625//24981863//27773535//22608085 chr21:34861053-34861054(-) m6A CDS       24284625//24981863//27773535//22608085 chr21:34861083-34861084(-) m6A CDS       24284625//24981863//27773535//22608085 chr21:34861124-34861125(-) m6A CDS       24284625//24981863//27773535//22608085 chr21:34861133-34861134(-) m6A CDS       24284625//24981863//27773535//22608085 chr21:34861181-34861182(-) m6A CDS       24284625//24981863//27773535//22608085 chr21:34861208-34861209(-) m6A CDS       24284625//24981863//27773535//22608085 chr21:34861221-34861222(-) m6A CDS       24284625//24981863//27773535//22608085 chr21:34861264-34861265(-) m6A CDS       24284625//24981863//27773535//22608085 chr21:34861312-34861313(-) m6A CDS       24284625//27773535//22608085 chr21:34861376-34861377(-) m6A CDS       24284625//24981863//27773535//22608085 chr21:34861538-34861539(-) m6A CDS       22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	DNAJC28	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US5-2-3p
Interactor2: DNAJC28

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg