Basic Information:

  VIRBase ID:  

VHID00228914

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US5-2-3p:  MIMAT0001580          SEMA3E:  NM_012431     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US5-2-3p	SEMA3E
miRBase Accession/Entrez ID	MIMAT0001580	9723
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	coll-5//M-SEMAH//M-SemaK//SEMAH

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SEMA3E	chr7:83171650(-) A-I      intronic chr7:83246103(-) A-I      intronic chr7:83229868(-) A-I      intronic chr7:83171487(-) A-I      intronic chr7:83074125(-) A-I      intronic chr7:83171476(-) A-I      intronic chr7:83082528(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SEMA3E	chr7:82996891-82996892(-) m6A 3'UTR       24981863 chr7:82996908-82996909(-) m6A CDS       24981863 chr7:82996943-82996944(-) m6A CDS       24981863 chr7:82997108-82997109(-) m6A CDS       24209618//24981863//22608085 chr7:82997163-82997164(-) m6A CDS       24209618//24981863//22608085 chr7:82997263-82997264(-) m6A CDS       24209618//25456834//24981863//22608085 chr7:82997278-82997279(-) m6A CDS       24209618//25456834//24981863//22608085 chr7:82997322-82997323(-) m6A CDS       24209618//24981863//22608085 chr7:82997347-82997348(-) m6A CDS       24209618//24981863//22608085 chr7:83014623-83014624(-) m6A CDS       24209618//24981863//22608085 chr7:83277797-83277798(-) m6A CDS       24981863//22608085 chr7:83277867-83277868(-) m6A 5'UTR       24209618//25456834//24981863//22608085 chr7:83277905-83277906(-) m6A 5'UTR       24209618//25456834//24981863//22608085 chr7:83277911-83277912(-) m6A 5'UTR       24209618//25456834//24981863//22608085 chr7:83277991-83277992(-) m6A 5'UTR       24209618//24981863//22608085 chr7:83278056-83278057(-) m6A 5'UTR       24209618//24981863//22608085 chr7:83278095-83278096(-) m6A 5'UTR       24209618//24981863//22608085 chr7:83278109-83278110(-) m6A 5'UTR       24209618//24981863//22608085 chr7:83278114-83278115(-) m6A 5'UTR       24209618//24981863//22608085 chr7:83278189-83278190(-) m6A 5'UTR       24209618//24981863 chr7:83278263-83278264(-) m6A 5'UTR       24209618

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SEMA3E	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US5-2-3p
Interactor2: SEMA3E

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Targetscan
Support Database	RepTar//VmiReg