Basic Information:

  VIRBase ID:  

VHID00228832

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US5-2-3p:  MIMAT0001580          VNN1:  NM_004666     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US5-2-3p	VNN1
miRBase Accession/Entrez ID	MIMAT0001580	8876
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HDLCQ8//Tiff66

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	VNN1	chr6:133013025(-) A-I      intronic chr6:133013023(-) A-I      intronic chr6:133012974(-) A-I      intronic chr6:133013038(-) A-I      intronic chr6:133013035(-) A-I      intronic chr6:133033462(-) A-I      intronic chr6:133033453(-) A-I      intronic chr6:133033477(-) A-I      intronic chr6:133010063(-) A-I      intronic chr6:133033449(-) A-I      intronic chr6:133012952(-) A-I      intronic chr6:133010267(-) A-I      intronic chr6:133010166(-) A-I      intronic chr6:133033471(-) A-I      intronic chr6:133013116(-) A-I      intronic chr6:133010070(-) A-I      intronic chr6:133033362(-) A-I      intronic chr6:133010228(-) A-I      intronic chr6:133034029(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	VNN1	chr6:133003591-133003592(-) m6A 3'UTR       27773535 chr6:133003631-133003632(-) m6A 3'UTR       27773535 chr6:133003644-133003645(-) m6A 3'UTR       27773535 chr6:133003655-133003656(-) m6A 3'UTR       27773535 chr6:133003723-133003724(-) m6A 3'UTR       27773535 chr6:133003763-133003764(-) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	VNN1	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US5-2-3p
Interactor2: VNN1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Targetscan
Support Database	RepTar//VmiReg