Basic Information:

  VIRBase ID:  

VHID00227914

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US5-1:  MIMAT0001579          AMOT:  NM_001113490     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US5-1	AMOT
miRBase Accession/Entrez ID	MIMAT0001579	154796
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	AMOT	chrX:112066244(-) A-I      NonSyn:Ile->Met chrX:112066194(-) A-I      NonSyn:Asn->Ser chrX:112066236(-) A-I      NonSyn:Gln->Arg chrX:112025169(-) A-I      intronic chrX:112025179(-) A-I      intronic chrX:112025182(-) A-I      intronic chrX:112025192(-) A-I      intronic chrX:112066229(-) A-I      Syn:Thr->Thr chrX:112066246(-) A-I      NonSyn:Ile->Val chrX:112025389(-) A-I      intronic chrX:112024621(-) A-I      intronic chrX:112025390(-) A-I      intronic chrX:112025214(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	AMOT	chrX:112020322-112020323(-) m6A 3'UTR       24981863 chrX:112021531-112021532(-) m6A 3'UTR       24981863//22608085 chrX:112021588-112021589(-) m6A 3'UTR       24981863//22608085 chrX:112021629-112021630(-) m6A 3'UTR       24981863//22608085 chrX:112021659-112021660(-) m6A 3'UTR       24981863//22608085 chrX:112021672-112021673(-) m6A 3'UTR       24981863//22608085 chrX:112021707-112021708(-) m6A 3'UTR       24981863//22608085 chrX:112021817-112021818(-) Gm CDS       - chrX:112021833-112021834(-) m6A CDS       22608085 chrX:112021853-112021854(-) m6A CDS       22608085 chrX:112022380-112022381(-) m6A CDS       27773536 chrX:112022758-112022759(-) m6A CDS       25456834//24981863//27773536//22608085 chrX:112022763-112022764(-) m6A CDS       25456834//24981863//27773536//22608085 chrX:112022785-112022786(-) m6A CDS       25456834//24981863//27773536//22608085 chrX:112022799-112022800(-) m6A CDS       25456834//24981863//27773536//22608085 chrX:112022812-112022813(-) m6A CDS       25456834//24981863//27773536//22608085 chrX:112022889-112022890(-) m6A CDS       22608085 chrX:112024338-112024339(-) m6A CDS       24981863 chrX:112035100-112035101(-) m6A CDS       24981863 chrX:112048250-112048251(-) m6A CDS       24981863//27773535 chrX:112053145-112053146(-) m6A CDS       24981863//27773535 chrX:112053156-112053157(-) m6A CDS       24981863 chrX:112053202-112053203(-) m6A CDS       24981863//27773536 chrX:112054529-112054530(-) m6A CDS       24981863//27773536 chrX:112054580-112054581(-) m6A CDS       24981863//27773536 chrX:112054614-112054615(-) m6A CDS       24981863 chrX:112058946-112058947(-) m6A 5'UTR//CDS       27773535 chrX:112065548-112065549(-) m6A CDS//intron       - chrX:112065652-112065653(-) m6A CDS//intron       24981863//27773535//22608085 chrX:112065860-112065861(-) m6A CDS//intron       24209618//25456834//24981863//27773535//27773536//22608085 chrX:112065868-112065869(-) m6A CDS//intron       24209618//25456834//24981863//27773535//27773536//22608085 chrX:112065927-112065928(-) m6A CDS//intron       24209618//25456834//24981863//27773536//22608085 chrX:112066039-112066040(-) m6A CDS//intron       24209618//24981863//22608085 chrX:112066088-112066089(-) m6A CDS//intron       24209618//24981863//22608085 chrX:112066117-112066118(-) m6A CDS//intron       24209618//24981863//22608085 chrX:112066157-112066158(-) m6A CDS//intron       24209618 chrX:112075583-112075584(-) m6A 5'UTR//exon       27773536 chrX:112083734-112083735(-) m6A 5'UTR//exon       27773536 chrX:112083976-112083977(-) m6A 5'UTR       24981863//27773535//22608085 chrX:112083984-112083985(-) m6A 5'UTR       24981863//27773535//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	AMOT	Exosome Blood     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-US5-1	Panobinostat       6918837 Irinotecan       60838 Topotecan       60700 l-685,458       5479543 Palbociclib       5330286 Sorafenib       216239 5-Chloro-N4-(2-(isopropylsulfonyl)phenyl)-N2-(2-methoxy-4-(4-(4-methylpiperazin-1-yl)piperidin-1-yl)phenyl)pyrimidine-2,4-diamine       16038120 Dovitinib       135398510 Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US5-1
Interactor2: AMOT

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg