Basic Information:
VIRBase ID: VHID00226613
Virus: Human betaherpesvirus 5 (HHV-5)
Host: Homo sapiens
Confidence Score: 0.9523
Interaction Type: Virus-Host interaction
Predicted Binding:
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Interactor Information:
Interactor1
Interactor2
Symbol
hcmv-miR-US5-1
VAMP3
miRBase Accession/Entrez ID
MIMAT0001579
9341
Organism
Human betaherpesvirus 5 (HHV-5)
Homo sapiens
Category
miRNA
mRNA
Alias
-
CEB
RNA Editing:
Resource
Symbol
Editing Position
Change
Genetic Region
RADAR
VAMP3
RNA Modification:
Resource
Symbol
ModificationPosition
Type
Genomic Context
PMID
RMBase
VAMP3
RNA Localization:
Resource
Symbol
Subcellular Localization
Tissue or Cell Line
PMID
RNALocate
VAMP3
Related Drug Information:
Resource
Symbol
Drug Name
PubChem ID
RNAactDrug
hcmv-miR-US5-1
Interaction Network (The top 100 interactions) :
Interactor1: hcmv-miR-US5-1
Interactor2: VAMP3
Evidence Support:
Strong-Evidence
Luciferase reporter assay//Western blot
Weak-Evidence
RIP-Chip
Prediction-Evidence
cRep//PITA//Targetscan
Support Database
RepTar//VmiReg
References:
PMID
24629342
Target region
None
Source
RepTar//VmiReg
Interactor1 expression
None
Tissue or cell line
293T cells
Interactor2 expression
None
Description
We find that HCMV miRs UL112-1,US5-1, and US5-2 target multiple components of the host secretory pathway, including VAMP3, RAB5C, RAB11A, SNAP23, and CDC42.