Detail Information

Basic Information:


  VIRBase ID:  

VHID00226162

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US5-1:           KIF3C:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-US5-1 KIF3C
miRBase
Accession/Entrez ID		 MIMAT0001579 3797
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR KIF3C
chr2:26198249(-) A-I      intronic
chr2:26198244(-) A-I      intronic
chr2:26198198(-) A-I      intronic
chr2:26198225(-) A-I      intronic
chr2:26198204(-) A-I      intronic
chr2:26198224(-) A-I      intronic
chr2:26198298(-) A-I      intronic
chr2:26190638(-) A-I      intronic
chr2:26183729(-) A-I      intronic
chr2:26183736(-) A-I      intronic
chr2:26172856(-) A-I      intronic
chr2:26198209(-) A-I      intronic
chr2:26161990(-) A-I      intronic
chr2:26172845(-) A-I      intronic
chr2:26172852(-) A-I      intronic
chr2:26198295(-) A-I      intronic
chr2:26198207(-) A-I      intronic
chr2:26172226(-) A-I      intronic
chr2:26162005(-) A-I      intronic
chr2:26162006(-) A-I      intronic
chr2:26172865(-) A-I      intronic
chr2:26198206(-) A-I      intronic
chr2:26198255(-) A-I      intronic
chr2:26190689(-) A-I      intronic
chr2:26183759(-) A-I      intronic
chr2:26167378(-) A-I      intronic
chr2:26190681(-) A-I      intronic
chr2:26167399(-) A-I      intronic
chr2:26167402(-) A-I      intronic
chr2:26167408(-) A-I      intronic
chr2:26198197(-) A-I      intronic
chr2:26162007(-) A-I      intronic
chr2:26162069(-) A-I      intronic
chr2:26162064(-) A-I      intronic
chr2:26159176(-) A-I      intronic
chr2:26159160(-) A-I      intronic
chr2:26158526(-) A-I      intronic
chr2:26158520(-) A-I      intronic
chr2:26158037(-) A-I      intronic
chr2:26155209(-) A-I      intronic
chr2:26159183(-) A-I      intronic
chr2:26155201(-) A-I      intronic
chr2:26194812(-) A-I      intronic
chr2:26194799(-) A-I      intronic
chr2:26194029(-) A-I      intronic
chr2:26194017(-) A-I      intronic
chr2:26190648(-) A-I      intronic
chr2:26190635(-) A-I      intronic
chr2:26190433(-) A-I      intronic
chr2:26190432(-) A-I      intronic
chr2:26186699(-) A-I      intronic
chr2:26153611(-) A-I      intronic
chr2:26154244(-) A-I      intronic
chr2:26153339(-) A-I      intronic
chr2:26186686(-) A-I      intronic
chr2:26183707(-) A-I      intronic
chr2:26175921(-) A-I      intronic
chr2:26175664(-) A-I      intronic
chr2:26168762(-) A-I      intronic
chr2:26154251(-) A-I      intronic
chr2:26168750(-) A-I      intronic
chr2:26167509(-) A-I      intronic
chr2:26153621(-) A-I      intronic
chr2:26158050(-) A-I      intronic
chr2:26153441(-) A-I      intronic
chr2:26167493(-) A-I      intronic
chr2:26167492(-) A-I      intronic
chr2:26163277(-) A-I      intronic
chr2:26198232(-) A-I      intronic
chr2:26198065(-) A-I      intronic
chr2:26194891(-) A-I      intronic
chr2:26194823(-) A-I      intronic
chr2:26175933(-) A-I      intronic
chr2:26163376(-) A-I      intronic
chr2:26154968(-) A-I      intronic
chr2:26194796(-) A-I      intronic
chr2:26166703(-) A-I      intronic
chr2:26175706(-) A-I      intronic
chr2:26158510(-) A-I      intronic
chr2:26155283(-) A-I      intronic
chr2:26166979(-) A-I      intronic
chr2:26154645(-) A-I      intronic
chr2:26154967(-) A-I      intronic
chr2:26194690(-) A-I      intronic
chr2:26167479(-) A-I      intronic
chr2:26163754(-) A-I      intronic
chr2:26164369(-) A-I      intronic
chr2:26158893(-) A-I      intronic
chr2:26158409(-) A-I      intronic
chr2:26198247(-) A-I      intronic
chr2:26173337(-) A-I      intronic
chr2:26160668(-) A-I      intronic
chr2:26175893(-) A-I      intronic
chr2:26163704(-) A-I      intronic
chr2:26186246(-) A-I      intronic
chr2:26169607(-) A-I      intronic
chr2:26167392(-) A-I      intronic
chr2:26187011(-) A-I      intronic
chr2:26159205(-) A-I      intronic
chr2:26154603(-) A-I      intronic
chr2:26154775(-) A-I      intronic
chr2:26158328(-) A-I      intronic
chr2:26159109(-) A-I      intronic
chr2:26160712(-) A-I      intronic
chr2:26194723(-) A-I      intronic
chr2:26183641(-) A-I      intronic
chr2:26163340(-) A-I      intronic
chr2:26167476(-) A-I      intronic
chr2:26170828(-) A-I      intronic
chr2:26168900(-) A-I      intronic
chr2:26166467(-) A-I      intronic
chr2:26153419(-) A-I      intronic
chr2:26161974(-) A-I      intronic
chr2:26157666(-) A-I      intronic
chr2:26194246(-) A-I      intronic
chr2:26172880(-) A-I      intronic
chr2:26172964(-) A-I      intronic
chr2:26181732(-) A-I      intronic
chr2:26172676(-) A-I      intronic
chr2:26175047(-) A-I      intronic
chr2:26162600(-) A-I      intronic
chr2:26168729(-) A-I      intronic
chr2:26198154(-) A-I      intronic
chr2:26194842(-) A-I      intronic
chr2:26190493(-) A-I      intronic
chr2:26154953(-) A-I      intronic
chr2:26198281(-) A-I      intronic
chr2:26181328(-) A-I      intronic
chr2:26173371(-) A-I      intronic
chr2:26167973(-) A-I      intronic
chr2:26176368(-) A-I      intronic
chr2:26157734(-) A-I      intronic
chr2:26175454(-) A-I      intronic
chr2:26168895(-) A-I      intronic
chr2:26169985(-) A-I      intronic
chr2:26155445(-) A-I      intronic
chr2:26157991(-) A-I      intronic
chr2:26176016(-) A-I      intronic
chr2:26156531(-) A-I      intronic
chr2:26163794(-) A-I      intronic
chr2:26198194(-) A-I      intronic
chr2:26158448(-) A-I      intronic
chr2:26163673(-) A-I      intronic
chr2:26176129(-) A-I      intronic
chr2:26189009(-) A-I      intronic
chr2:26176358(-) A-I      intronic
chr2:26154671(-) A-I      intronic
chr2:26166999(-) A-I      intronic
chr2:26186980(-) A-I      intronic
chr2:26155039(-) A-I      intronic
chr2:26159182(-) A-I      intronic
chr2:26166462(-) A-I      intronic
chr2:26161948(-) A-I      intronic
chr2:26166946(-) A-I      intronic
chr2:26163662(-) A-I      intronic
chr2:26166671(-) A-I      intronic
chr2:26190459(-) A-I      intronic
chr2:26172924(-) A-I      intronic
chr2:26176327(-) A-I      intronic
chr2:26198190(-) A-I      intronic
chr2:26172757(-) A-I      intronic
chr2:26162074(-) A-I      intronic
chr2:26167014(-) A-I      intronic
chr2:26186204(-) A-I      intronic
chr2:26158111(-) A-I      intronic
chr2:26172793(-) A-I      intronic
chr2:26194715(-) A-I      intronic
chr2:26167317(-) A-I      intronic
chr2:26158360(-) A-I      intronic
chr2:26193374(-) A-I      intronic
chr2:26176038(-) A-I      intronic
chr2:26161997(-) A-I      intronic
chr2:26174971(-) A-I      intronic
chr2:26154183(-) A-I      intronic
chr2:26176463(-) A-I      intronic
chr2:26158506(-) A-I      intronic
chr2:26170823(-) A-I      intronic
chr2:26167371(-) A-I      intronic
chr2:26155909(-) A-I      intronic
chr2:26198286(-) A-I      intronic
chr2:26168349(-) A-I      intronic
chr2:26172716(-) A-I      intronic
chr2:26158834(-) A-I      intronic
chr2:26163292(-) A-I      intronic
chr2:26155245(-) A-I      intronic
chr2:26185344(-) A-I      intronic
chr2:26163572(-) A-I      intronic
chr2:26163616(-) A-I      intronic
chr2:26158374(-) A-I      intronic
chr2:26169636(-) A-I      intronic
chr2:26186614(-) A-I      intronic
chr2:26187390(-) A-I      intronic
chr2:26176119(-) A-I      intronic
chr2:26160786(-) A-I      intronic
chr2:26169276(-) A-I      intronic
chr2:26167995(-) A-I      intronic
chr2:26155041(-) A-I      intronic
chr2:26183650(-) A-I      intronic
chr2:26183588(-) A-I      intronic
chr2:26174904(-) A-I      intronic
chr2:26162783(-) A-I      intronic
chr2:26176394(-) A-I      intronic
chr2:26175025(-) A-I      intronic
chr2:26199590(-) A-I      intronic
chr2:26190661(-) A-I      intronic
chr2:26167055(-) A-I      intronic
chr2:26176026(-) A-I      intronic
chr2:26173318(-) A-I      intronic
chr2:26190654(-) A-I      intronic
chr2:26163592(-) A-I      intronic
chr2:26183055(-) A-I      intronic
chr2:26163403(-) A-I      intronic
chr2:26194701(-) A-I      intronic
chr2:26197116(-) A-I      intronic
chr2:26176435(-) A-I      intronic
chr2:26158504(-) A-I      intronic
chr2:26154609(-) A-I      intronic
chr2:26190553(-) A-I      intronic
chr2:26175494(-) A-I      intronic
chr2:26198303(-) A-I      intronic
chr2:26158333(-) A-I      intronic
chr2:26173290(-) A-I      intronic
chr2:26176675(-) A-I      intronic
chr2:26175118(-) A-I      intronic
chr2:26156374(-) A-I      intronic
chr2:26168353(-) A-I      intronic
chr2:26192784(-) A-I      intronic
chr2:26172192(-) A-I      intronic
chr2:26154178(-) A-I      intronic
chr2:26167419(-) A-I      intronic
chr2:26167282(-) A-I      intronic
chr2:26163189(-) A-I      intronic
chr2:26194653(-) A-I      intronic
chr2:26168834(-) A-I      intronic
chr2:26158324(-) A-I      intronic
chr2:26172314(-) A-I      intronic
chr2:26157655(-) A-I      intronic
chr2:26156089(-) A-I      intronic
chr2:26169269(-) A-I      intronic
chr2:26198168(-) A-I      intronic
chr2:26167013(-) A-I      intronic
chr2:26158266(-) A-I      intronic
chr2:26154615(-) A-I      intronic
chr2:26172862(-) A-I      intronic
chr2:26171309(-) A-I      intronic
chr2:26168823(-) A-I      intronic
chr2:26153787(-) A-I      intronic
chr2:26172198(-) A-I      intronic
chr2:26199396(-) A-I      intronic
chr2:26196260(-) A-I      intronic
chr2:26153366(-) A-I      intronic
chr2:26163357(-) A-I      intronic
chr2:26153575(-) A-I      intronic
chr2:26162756(-) A-I      intronic
chr2:26175975(-) A-I      intronic
chr2:26163700(-) A-I      intronic
chr2:26186609(-) A-I      intronic
chr2:26176055(-) A-I      intronic
chr2:26163686(-) A-I      intronic
chr2:26164875(-) A-I      intronic
chr2:26163625(-) A-I      intronic
chr2:26163912(-) A-I      intronic
chr2:26194187(-) A-I      intronic
chr2:26158449(-) A-I      intronic
chr2:26169660(-) A-I      intronic
chr2:26175881(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED KIF3C
chr2:26153605(-) A-T intron -    22484847
chr2:26167479(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase KIF3C
chr2:26150060-26150061(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085
chr2:26150095-26150096(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr2:26150149-26150150(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr2:26150196-26150197(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr2:26150233-26150234(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr2:26150320-26150321(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr2:26150410-26150411(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942
chr2:26150483-26150484(-) m6A 3'UTR       25456834//24981863
chr2:26150491-26150492(-) m6A 3'UTR       25456834//24981863//26404942
chr2:26150949-26150950(-) m6A 3'UTR       27773535
chr2:26151097-26151098(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22608085
chr2:26151106-26151107(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22608085
chr2:26151118-26151119(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22608085
chr2:26151134-26151135(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22608085
chr2:26151159-26151160(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22608085
chr2:26151166-26151167(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22608085
chr2:26151195-26151196(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22608085
chr2:26151211-26151212(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr2:26151260-26151261(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr2:26151296-26151297(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr2:26151329-26151330(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085
chr2:26151364-26151365(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr2:26151371-26151372(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr2:26151392-26151393(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr2:26151400-26151401(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085
chr2:26151483-26151484(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr2:26151814-26151815(-) m6A 3'UTR       24981863
chr2:26151856-26151857(-) m6A 3'UTR//CDS       24981863
chr2:26174720-26174721(-) m6A CDS//exon       -
chr2:26174732-26174733(-) m6A CDS//exon       -
chr2:26174756-26174757(-) m6A CDS//exon       -
chr2:26177146-26177147(-) m6A CDS//exon       24209618//24981863
chr2:26177154-26177155(-) m6A CDS//exon       24209618//24981863
chr2:26177180-26177181(-) m6A CDS//exon       24209618//24981863
chr2:26177213-26177214(-) m6A CDS//exon       24284625//24209618//24981863//27773536
chr2:26178418-26178419(-) m6A CDS//exon       24284625//24209618//24981863//27773536
chr2:26178426-26178427(-) m6A CDS//exon       24284625//24209618//24981863//27773536
chr2:26178480-26178481(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536
chr2:26179238-26179239(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27773536
chr2:26179256-26179257(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536
chr2:26179278-26179279(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536
chr2:26203277-26203278(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536
chr2:26203290-26203291(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr2:26203397-26203398(-) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22608085
chr2:26203419-26203420(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr2:26203549-26203550(-) m1A CDS       26863196
chr2:26203656-26203657(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22608085
chr2:26203665-26203666(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22608085
chr2:26203686-26203687(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22608085
chr2:26203695-26203696(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22608085
chr2:26203780-26203781(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22608085
chr2:26203803-26203804(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22608085
chr2:26203830-26203831(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22608085
chr2:26204025-26204026(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr2:26204049-26204050(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr2:26204082-26204083(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr2:26204185-26204186(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr2:26204190-26204191(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr2:26204199-26204200(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr2:26204250-26204251(-) m6A CDS       24284625//25456834//24981863//26404942//27773535//27773536//22608085
chr2:26204269-26204270(-) m6A CDS       24284625//25456834//24981863//26404942//27773535//27773536//22608085
chr2:26204277-26204278(-) m6A CDS       24284625//25456834//24981863//26404942//27773535//27773536//22608085
chr2:26204322-26204323(-) m6A CDS       24284625//25456834//24981863//27773535//27773536//22608085
chr2:26204379-26204380(-) m6A CDS       24284625//25456834//24981863//26404942//27773535//27773536//22608085
chr2:26204458-26204459(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22608085
chr2:26204476-26204477(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22608085
chr2:26204538-26204539(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27371828//27773536//22608085
chr2:26204557-26204558(-) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27371828//27773536//22608085
chr2:26204617-26204618(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27371828//27773536//22608085
chr2:26204649-26204650(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27371828//27773536//22608085
chr2:26204672-26204673(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27371828//27773536//22608085
chr2:26204773-26204774(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr2:26204835-26204836(-) m6A 5'UTR       24284625//24209618//25456834//24981863//27371828//27773536
chr2:26204959-26204960(-) m6A 5'UTR       24284625//24209618//25456834//27773536
chr2:26204982-26204983(-) m6A 5'UTR       24284625//24209618//25456834//27773536
chr2:26205167-26205168(-) m6A 5'UTR//intron       24284625//25456834//27371828//27773536
chr2:26205227-26205228(-) m6A 5'UTR//intron       24284625//25456834//24981863//27371828//27773536
chr2:26205262-26205263(-) m6A 5'UTR       24284625//25456834//24981863//27371828//27773536
chr2:26205580-26205581(-) m6A 5'UTR       24981863//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate KIF3C
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hcmv-miR-US5-1
Panobinostat       6918837
Irinotecan       60838
Topotecan       60700
l-685,458       5479543
Palbociclib       5330286
Sorafenib       216239
5-Chloro-N4-(2-(isopropylsulfonyl)phenyl)-N2-(2-methoxy-4-(4-(4-methylpiperazin-1-yl)piperidin-1-yl)phenyl)pyrimidine-2,4-diamine       16038120
Dovitinib       135398510
Crizotinib       11626560

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-US5-1
Interactor2: KIF3C

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//Rep//Targetscan
Support Database RepTar//VmiReg

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