Basic Information:

  VIRBase ID:  

VHID00225597

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL148D:  MIMAT0001578          LGI3:  NM_139278     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL148D	LGI3
miRBase Accession/Entrez ID	MIMAT0001578	203190
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	LGIL4

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	LGI3	chr8:22010792(-) A-I      intronic chr8:22007901(-) A-I      intronic chr8:22010476(-) A-I      intronic chr8:22010775(-) A-I      intronic chr8:22011184(-) A-I      intronic chr8:22010774(-) A-I      intronic chr8:22010849(-) A-I      intronic chr8:22011057(-) A-I      intronic chr8:22010133(-) A-I      intronic chr8:22010879(-) A-I      intronic chr8:22010771(-) A-I      intronic chr8:22010971(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	LGI3	chr8:22005456-22005457(-) m6A 3'UTR//exon       24284625//24981863//22575960 chr8:22005474-22005475(-) m6A 3'UTR//exon       24284625//24981863//22575960 chr8:22005516-22005517(-) m6A 3'UTR//exon       24284625//24981863//22575960 chr8:22005585-22005586(-) m6A 3'UTR//exon       24284625//24981863//22575960 chr8:22005699-22005700(-) m6A CDS//exon       24284625//24981863 chr8:22005717-22005718(-) m6A CDS//exon       24284625//24981863 chr8:22006360-22006361(-) m6A CDS//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-UL148D	Exosome K562 cells     24460325
	LGI3	Exosome Blood     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-UL148D	Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL148D
Interactor2: LGI3

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg