Detail Information

Basic Information:


  VIRBase ID:  

VHID00225586

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL148D:           LIPH:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL148D LIPH
miRBase
Accession/Entrez ID		 MIMAT0001578 200879
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - AH//ARWH2//HYPT7//LAH2//LPDLR//mPA-PLA1//PLA1B

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR LIPH
chr3:185265531(-) A-I      intronic
chr3:185265537(-) A-I      intronic
chr3:185265610(-) A-I      intronic
chr3:185257297(-) A-I      intronic
chr3:185260915(-) A-I      intronic
chr3:185260914(-) A-I      intronic
chr3:185260910(-) A-I      intronic
chr3:185242268(-) A-I      intronic
chr3:185234194(-) A-I      intronic
chr3:185234174(-) A-I      intronic
chr3:185265612(-) A-I      intronic
chr3:185268425(-) A-I      intronic
chr3:185268430(-) A-I      intronic
chr3:185268455(-) A-I      intronic
chr3:185268612(-) A-I      intronic
chr3:185234104(-) A-I      intronic
chr3:185234102(-) A-I      intronic
chr3:185257296(-) A-I      intronic
chr3:185260945(-) A-I      intronic
chr3:185261776(-) A-I      intronic
chr3:185234099(-) A-I      intronic
chr3:185233523(-) A-I      intronic
chr3:185261838(-) A-I      intronic
chr3:185233522(-) A-I      intronic
chr3:185262322(-) A-I      intronic
chr3:185262370(-) A-I      intronic
chr3:185262389(-) A-I      intronic
chr3:185257282(-) A-I      intronic
chr3:185230549(-) A-I      intronic
chr3:185249744(-) A-I      intronic
chr3:185263479(-) A-I      intronic
chr3:185233512(-) A-I      intronic
chr3:185228945(-) A-I      intronic
chr3:185264233(-) A-I      intronic
chr3:185249448(-) A-I      intronic
chr3:185264265(-) A-I      intronic
chr3:185249090(-) A-I      intronic
chr3:185244869(-) A-I      intronic
chr3:185242330(-) A-I      intronic
chr3:185264552(-) A-I      intronic
chr3:185265381(-) A-I      intronic
chr3:185265527(-) A-I      intronic
chr3:185258472(-) A-I      intronic
chr3:185258261(-) A-I      intronic
chr3:185249452(-) A-I      intronic
chr3:185257299(-) A-I      intronic
chr3:185260814(-) A-I      intronic
chr3:185268790(-) A-I      intronic
chr3:185230471(-) A-I      intronic
chr3:185258443(-) A-I      intronic
chr3:185260897(-) A-I      intronic
chr3:185249779(-) A-I      intronic
chr3:185264586(-) A-I      intronic
chr3:185249424(-) A-I      intronic
chr3:185265454(-) A-I      intronic
chr3:185268902(-) A-I      intronic
chr3:185264416(-) A-I      intronic
chr3:185227021(-) A-I      intronic
chr3:185262271(-) A-I      intronic
chr3:185261809(-) A-I      intronic
chr3:185247339(-) A-I      intronic
chr3:185226961(-) A-I      intronic
chr3:185259393(-) A-I      intronic
chr3:185268960(-) A-I      intronic
chr3:185228958(-) A-I      intronic
chr3:185255633(-) A-I      intronic
chr3:185224388(-) A-I      3'UTR
chr3:185259285(-) A-I      intronic
chr3:185268426(-) A-I      intronic
chr3:185261876(-) A-I      intronic
chr3:185242507(-) A-I      intronic
chr3:185230276(-) A-I      intronic
chr3:185268862(-) A-I      intronic
chr3:185268813(-) A-I      intronic
chr3:185260834(-) A-I      intronic
chr3:185237458(-) A-I      intronic
chr3:185242998(-) A-I      intronic
chr3:185268539(-) A-I      intronic
chr3:185268850(-) A-I      intronic
chr3:185259682(-) A-I      intronic
chr3:185262281(-) A-I      intronic
chr3:185268454(-) A-I      intronic
chr3:185260853(-) A-I      intronic
chr3:185228450(-) A-I      intronic
chr3:185242999(-) A-I      intronic
chr3:185259642(-) A-I      intronic
chr3:185260332(-) A-I      intronic
chr3:185227034(-) A-I      intronic
chr3:185242846(-) A-I      intronic
chr3:185268614(-) A-I      intronic
chr3:185260242(-) A-I      intronic
chr3:185226957(-) A-I      intronic
chr3:185245756(-) A-I      intronic
chr3:185247361(-) A-I      intronic
chr3:185227820(-) A-I      intronic
chr3:185226861(-) A-I      intronic
chr3:185259673(-) A-I      intronic
chr3:185262362(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED LIPH
chr3:185229464(-) A-I exon CDS    19478186
chr3:185226838(-) T-C intron -    22484847
chr3:185226957(-) A-G intron -    22484847
chr3:185226961(-) A-G intron -    22484847
chr3:185227021(-) A-G intron -    22484847
chr3:185227034(-) A-G intron -    22484847
chr3:185233397(-) T-C intron -    22484847
chr3:185237458(-) A-G intron -    22484847
chr3:185238898(-) A-G intron -    22484847
chr3:185242507(-) A-G intron -    22484847
chr3:185242998(-) A-G intron -    22484847
chr3:185242999(-) A-G intron -    22484847
chr3:185247361(-) A-G intron -    22484847
chr3:185249779(-) A-G intron -    22484847
chr3:185258443(-) A-G intron -    22484847
chr3:185259204(-) C-A intron -    22484847
chr3:185259285(-) A-G intron -    22484847
chr3:185259393(-) A-G intron -    22484847
chr3:185260242(-) A-G intron -    22484847
chr3:185260332(-) A-G intron -    22484847
chr3:185260814(-) A-G intron -    22484847
chr3:185260834(-) A-G intron -    22484847
chr3:185260853(-) A-G intron -    22484847
chr3:185260897(-) A-G intron -    22484847
chr3:185262362(-) A-G intron -    22484847
chr3:185263940(-) A-T intron -    22484847
chr3:185264586(-) A-G intron -    22484847
chr3:185265454(-) A-G intron -    22484847
chr3:185266170(-) A-T intron -    22484847
chr3:185266171(-) C-T intron -    22484847
chr3:185266216(-) T-G intron -    22484847
chr3:185268426(-) A-G intron -    22484847
chr3:185268454(-) A-G intron -    22484847
chr3:185268522(-) A-G intron -    22484847
chr3:185268539(-) A-G intron -    22484847
chr3:185268614(-) A-G intron -    22484847
chr3:185268631(-) A-G intron -    22484847
chr3:185268729(-) A-G intron -    22484847
chr3:185268790(-) A-G intron -    22484847
chr3:185268797(-) A-G intron -    22484847
chr3:185268813(-) A-G intron -    22484847
chr3:185268902(-) A-G intron -    22484847
chr3:185268960(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase LIPH
chr3:185225343-185225344(-) m6A 3'UTR       24981863
chr3:185225770-185225771(-) m6A 3'UTR       24981863//28052920//27773535
chr3:185225831-185225832(-) m6A 3'UTR       25456834//24981863//28052920//27773535
chr3:185225859-185225860(-) m6A 3'UTR       25456834//24981863//28052920//27773535
chr3:185226141-185226142(-) m6A 3'UTR       24981863//28052920//27773535//22575960
chr3:185226201-185226202(-) m6A 3'UTR       24981863//28052920//26404942//27773535//22575960
chr3:185226220-185226221(-) m6A 3'UTR       24981863//28052920//26404942//27773535//22575960
chr3:185226421-185226422(-) m6A 3'UTR       24981863//27773535
chr3:185226470-185226471(-) m6A 3'UTR       24981863//28052920//27773535
chr3:185226565-185226566(-) m6A 3'UTR       24284625//24981863//28052920//27773535
chr3:185226618-185226619(-) m6A 3'UTR//CDS       24981863//28052920//27773535
chr3:185229481-185229482(-) m6A CDS//intron       27773535
chr3:185232221-185232222(-) m6A CDS       27773535
chr3:185232233-185232234(-) m6A CDS       27773535
chr3:185232254-185232255(-) m6A CDS       27773535
chr3:185232275-185232276(-) m6A CDS       27773535
chr3:185234925-185234926(-) m6A CDS       27773535
chr3:185252599-185252600(-) m6A 3'UTR//CDS       24981863
chr3:185252670-185252671(-) m6A 3'UTR//CDS       24981863
chr3:185252758-185252759(-) m6A 3'UTR//CDS       24981863
chr3:185252778-185252779(-) m6A 3'UTR//CDS       24981863
chr3:185252803-185252804(-) m6A 3'UTR//CDS       24981863
chr3:185252820-185252821(-) m6A 3'UTR//CDS       24981863
chr3:185252855-185252856(-) m6A 3'UTR//CDS       24981863
chr3:185270323-185270324(-) m6A 5'UTR       24981863
chr3:185270388-185270389(-) m6A 5'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hcmv-miR-UL148D
Exosome K562 cells     24460325
LIPH
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hcmv-miR-UL148D
Crizotinib       11626560

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL148D
Interactor2: LIPH

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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