Basic Information:

  VIRBase ID:  

VHID00224881

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL148D:  MIMAT0001578          LIMS2:  NM_001256542     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL148D	LIMS2
miRBase Accession/Entrez ID	MIMAT0001578	55679
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	LGMD2W//MDRCMTT//PINCH-2//PINCH2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	LIMS2	chr2:128415886(-) A-I      intronic chr2:128415745(-) A-I      intronic chr2:128415851(-) A-I      intronic chr2:128426075(-) A-I      intronic chr2:128415878(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	LIMS2	chr2:128396561-128396562(-) m6A 3'UTR//exon       27371828 chr2:128396571-128396572(-) m6A 3'UTR//exon       27371828 chr2:128399878-128399879(-) m6A exon//intron       27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-UL148D	Exosome K562 cells     24460325
	LIMS2	Cytosol HeLa-S3 cells     - Exosome Blood     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-UL148D	Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL148D
Interactor2: LIMS2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg