Basic Information:

  VIRBase ID:  

VHID00224815

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL148D:  MIMAT0001578          C20orf27:  NR_047675     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL148D	C20orf27
miRBase Accession/Entrez ID	MIMAT0001578	54976
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	C20orf27	chr20:3742068(-) A-I      intronic chr20:3742837(-) A-I      intronic chr20:3742795(-) A-I      intronic chr20:3734402(-) A-I      3'UTR chr20:3743150(-) A-I      intronic chr20:3738391(-) A-I      intronic chr20:3737841(-) A-I      intronic chr20:3737885(-) A-I      intronic chr20:3743182(-) A-I      intronic chr20:3738422(-) A-I      intronic chr20:3737961(-) A-I      intronic chr20:3738454(-) A-I      intronic chr20:3742121(-) A-I      intronic chr20:3738404(-) A-I      intronic chr20:3744157(-) A-I      intronic chr20:3742210(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	C20orf27	chr20:3734385-3734386(-) m6A 3'UTR       24284625//25456834 chr20:3734664-3734665(-) m6A 3'UTR       - chr20:3740702-3740703(-) m6A CDS//intron       27773536 chr20:3747872-3747873(-) m6A 5'UTR//intron       27773536 chr20:3747952-3747953(-) m6A 5'UTR//intron       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-UL148D	Exosome K562 cells     24460325
	C20orf27	Chromatin K562 cells     - Exosome Blood     - Ribosome Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-UL148D	Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL148D
Interactor2: C20orf27

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg