Basic Information:

  VIRBase ID:  

VHID00224715

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL148D:  MIMAT0001578          REEP2:  NR_073448     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL148D	REEP2
miRBase Accession/Entrez ID	MIMAT0001578	51308
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C5orf19//SGC32445//SPG72//Yip2d

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	REEP2	chr5:137779386(+) A-I      ncRNA chr5:137778702(+) A-I      intronic chr5:137779378(+) A-I      ncRNA chr5:137778495(+) A-I      intronic chr5:137779489(+) A-I      ncRNA chr5:137779463(+) A-I      ncRNA chr5:137779360(+) A-I      ncRNA chr5:137779295(+) A-I      ncRNA chr5:137778456(+) A-I      intronic chr5:137778974(+) A-I      intronic chr5:137779257(+) A-I      intronic chr5:137777438(+) A-I      intronic chr5:137778572(+) A-I      intronic chr5:137777382(+) A-I      intronic chr5:137779331(+) A-I      ncRNA chr5:137779028(+) A-I      intronic chr5:137779099(+) A-I      intronic chr5:137779343(+) A-I      ncRNA chr5:137779413(+) A-I      ncRNA chr5:137778224(+) A-I      intronic chr5:137779504(+) A-I      ncRNA chr5:137778470(+) A-I      intronic chr5:137777596(+) A-I      intronic chr5:137778146(+) A-I      intronic chr5:137777418(+) A-I      intronic chr5:137777381(+) A-I      intronic chr5:137779029(+) A-I      intronic chr5:137777523(+) A-I      intronic chr5:137778471(+) A-I      intronic chr5:137779286(+) A-I      ncRNA chr5:137779348(+) A-I      ncRNA chr5:137779388(+) A-I      ncRNA chr5:137779438(+) A-I      ncRNA chr5:137779465(+) A-I      ncRNA chr5:137779372(+) A-I      ncRNA chr5:137779451(+) A-I      ncRNA chr5:137779349(+) A-I      ncRNA chr5:137779490(+) A-I      ncRNA

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	REEP2	chr5:137779370(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	REEP2	chr5:137780121-137780122(+) m6A 3'UTR//CDS//exon       - chr5:137780390-137780391(+) m6A exon//intron       24981863 chr5:137780473-137780474(+) m6A 3'UTR//CDS//exon       24981863 chr5:137780487-137780488(+) m6A 3'UTR//CDS//exon       24981863 chr5:137780518-137780519(+) m6A 3'UTR//CDS//exon       24981863 chr5:137781192-137781193(+) m6A 3'UTR//CDS//exon       - chr5:137781209-137781210(+) m6A 3'UTR//CDS//exon       24981863 chr5:137781237-137781238(+) m6A 3'UTR//CDS//exon       24981863 chr5:137781259-137781260(+) m6A 3'UTR//CDS//exon       24981863 chr5:137781386-137781387(+) m6A 3'UTR//CDS//exon       24981863 chr5:137781395-137781396(+) m6A 3'UTR//CDS//exon       24981863 chr5:137781413-137781414(+) m6A 3'UTR//CDS//exon       - chr5:137781496-137781497(+) m6A 3'UTR       24284625//25456834 chr5:137781655-137781656(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr5:137781669-137781670(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr5:137781693-137781694(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr5:137781853-137781854(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr5:137781912-137781913(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr5:137781951-137781952(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr5:137782227-137782228(+) m6A 3'UTR       24284625 chr5:137782452-137782453(+) m6A 3'UTR       24284625 chr5:137782465-137782466(+) m6A 3'UTR       24284625 chr5:137782477-137782478(+) m6A 3'UTR       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-UL148D	Exosome K562 cells     24460325
	REEP2	Exosome Blood     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-UL148D	Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL148D
Interactor2: REEP2

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg