Basic Information:

  VIRBase ID:  

VHID00224578

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL148D:  MIMAT0001578          RAB26:  NM_014353     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL148D	RAB26
miRBase Accession/Entrez ID	MIMAT0001578	25837
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	V46133

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RAB26	chr16:2198796-2198797(+) m1A 5'UTR//CDS//exon//intron       26863196 chr16:2199957-2199958(+) m6A CDS//exon       24284625 chr16:2199974-2199975(+) m6A CDS//exon       24284625 chr16:2200019-2200020(+) m6A CDS//exon       24284625 chr16:2202881-2202882(+) m6A 3'UTR//CDS//exon       24284625 chr16:2202971-2202972(+) m6A 3'UTR//exon//intron       24284625 chr16:2202993-2202994(+) m6A 3'UTR//CDS//exon       24284625 chr16:2203154-2203155(+) m6A CDS//exon       24284625 chr16:2203170-2203171(+) m6A CDS//exon       24284625 chr16:2203198-2203199(+) m6A CDS//exon       24284625 chr16:2203245-2203246(+) m6A exon//intron       - chr16:2203422-2203423(+) m6A 3'UTR//exon//intron       24284625//24981863//22575960 chr16:2203475-2203476(+) m6A 3'UTR//exon//intron       24284625//25456834//24981863//22575960 chr16:2203674-2203675(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr16:2203831-2203832(+) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//22575960//22608085 chr16:2203921-2203922(+) m6A 3'UTR//exon       24284625//25456834//24981863//22575960//22608085 chr16:2203996-2203997(+) m6A 3'UTR//exon       24284625//24981863 chr16:2204005-2204006(+) m6A 3'UTR//exon       24284625//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-UL148D	Exosome K562 cells     24460325
	RAB26	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-UL148D	Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL148D
Interactor2: RAB26

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg