Detail Information

Basic Information:


  VIRBase ID:  

VHID00224567

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL148D:           FJX1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL148D FJX1
miRBase
Accession/Entrez ID
MIMAT0001578 24147
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase FJX1
chr11:35640002-35640003(+) m6A 5'UTR       24209618//25456834//24981863//27773536
chr11:35640034-35640035(+) m6A 5'UTR       24209618//25456834//24981863//27773536//22575960
chr11:35640099-35640100(+) m6A 5'UTR       24209618//25456834//24981863//27773536//22575960
chr11:35640125-35640126(+) m6A 5'UTR       24209618//25456834//24981863//27773536
chr11:35640283-35640284(+) m6A CDS       24209618//24981863
chr11:35640314-35640315(+) m6A CDS       24209618//24981863
chr11:35640418-35640419(+) m6A CDS       24209618//24981863//27773536
chr11:35640886-35640887(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr11:35641037-35641038(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr11:35641051-35641052(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr11:35641127-35641128(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr11:35641196-35641197(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr11:35641244-35641245(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr11:35641294-35641295(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr11:35641326-35641327(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr11:35641403-35641404(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr11:35641492-35641493(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr11:35641581-35641582(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr11:35641619-35641620(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr11:35641692-35641693(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr11:35641781-35641782(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//22608085
chr11:35641875-35641876(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22608085
chr11:35641919-35641920(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085
chr11:35642049-35642050(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr11:35642063-35642064(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr11:35642071-35642072(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr11:35642090-35642091(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hcmv-miR-UL148D
Exosome K562 cells     24460325
FJX1
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hcmv-miR-UL148D

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL148D
Interactor2: FJX1

Evidence Support:


Prediction-Evidence cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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