Detail Information

Basic Information:


  VIRBase ID:  

VHID00224371

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL148D:           PRELID3A:      

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Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL148D PRELID3A
miRBase
Accession/Entrez ID
MIMAT0001578 10650
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - C18orf43//HFL-EDDG1//SLMO1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PRELID3A
chr18:12413348(+) A-I      intronic
chr18:12413338(+) A-I      intronic
chr18:12410735(+) A-I      intronic
chr18:12414560(+) A-I      intronic
chr18:12415491(+) A-I      intronic
chr18:12410770(+) A-I      intronic
chr18:12413763(+) A-I      intronic
chr18:12414505(+) A-I      intronic
chr18:12414534(+) A-I      intronic
chr18:12414565(+) A-I      intronic
chr18:12409283(+) A-I      intronic
chr18:12414574(+) A-I      intronic
chr18:12409305(+) A-I      intronic
chr18:12412316(+) A-I      intronic
chr18:12413299(+) A-I      intronic
chr18:12419834(+) A-I      intronic
chr18:12419785(+) A-I      intronic
chr18:12419135(+) A-I      intronic
chr18:12413614(+) A-I      intronic
chr18:12419124(+) A-I      intronic
chr18:12419111(+) A-I      intronic
chr18:12418955(+) A-I      intronic
chr18:12418954(+) A-I      intronic
chr18:12416568(+) A-I      intronic
chr18:12416440(+) A-I      intronic
chr18:12416439(+) A-I      intronic
chr18:12416370(+) A-I      intronic
chr18:12415539(+) A-I      intronic
chr18:12415388(+) A-I      intronic
chr18:12415117(+) A-I      intronic
chr18:12414991(+) A-I      intronic
chr18:12414666(+) A-I      intronic
chr18:12414646(+) A-I      intronic
chr18:12414637(+) A-I      intronic
chr18:12414575(+) A-I      intronic
chr18:12419134(+) A-I      intronic
chr18:12418932(+) A-I      intronic
chr18:12415164(+) A-I      intronic
chr18:12413708(+) A-I      intronic
chr18:12410920(+) A-I      intronic
chr18:12412448(+) A-I      intronic
chr18:12415191(+) A-I      intronic
chr18:12419507(+) A-I      intronic
chr18:12416447(+) A-I      intronic
chr18:12410898(+) A-I      intronic
chr18:12424878(+) A-I      intronic
chr18:12415028(+) A-I      intronic
chr18:12416453(+) A-I      intronic
chr18:12418959(+) A-I      intronic
chr18:12413291(+) A-I      intronic
chr18:12419957(+) A-I      intronic
chr18:12414569(+) A-I      intronic
chr18:12419204(+) A-I      intronic
chr18:12410881(+) A-I      intronic
chr18:12415439(+) A-I      intronic
chr18:12411274(+) A-I      intronic
chr18:12412218(+) A-I      intronic
chr18:12410722(+) A-I      intronic
chr18:12417449(+) A-I      intronic
chr18:12414604(+) A-I      intronic
chr18:12410835(+) A-I      intronic
chr18:12421978(+) A-I      intronic
chr18:12416518(+) A-I      intronic
chr18:12426002(+) A-I      intronic
chr18:12419236(+) A-I      intronic
chr18:12419997(+) A-I      intronic
chr18:12410757(+) A-I      intronic
chr18:12412463(+) A-I      intronic
chr18:12413709(+) A-I      intronic
chr18:12413257(+) A-I      intronic
chr18:12415424(+) A-I      intronic
chr18:12426117(+) A-I      intronic
chr18:12415192(+) A-I      intronic
chr18:12420058(+) A-I      intronic
chr18:12417302(+) A-I      intronic
chr18:12413295(+) A-I      intronic
chr18:12413229(+) A-I      intronic
chr18:12414566(+) A-I      intronic
chr18:12410813(+) A-I      intronic
chr18:12410796(+) A-I      intronic
chr18:12415517(+) A-I      intronic
chr18:12417395(+) A-I      intronic
chr18:12414622(+) A-I      intronic
chr18:12415425(+) A-I      intronic
chr18:12418930(+) A-I      intronic
chr18:12413367(+) A-I      intronic
chr18:12424964(+) A-I      intronic
chr18:12425070(+) A-I      intronic
chr18:12422008(+) A-I      intronic
chr18:12419967(+) A-I      intronic
chr18:12414578(+) A-I      intronic
chr18:12410715(+) A-I      intronic
chr18:12419936(+) A-I      intronic
chr18:12414469(+) A-I      intronic
chr18:12422555(+) A-I      intronic
chr18:12416851(+) A-I      intronic
chr18:12419068(+) A-I      intronic
chr18:12415190(+) A-I      intronic
chr18:12426188(+) A-I      intronic
chr18:12415398(+) A-I      intronic
chr18:12426259(+) A-I      intronic
chr18:12409266(+) A-I      intronic
chr18:12426187(+) A-I      intronic
chr18:12426058(+) A-I      intronic
chr18:12413381(+) A-I      intronic
chr18:12415057(+) A-I      intronic
chr18:12413232(+) A-I      intronic
chr18:12414454(+) A-I      intronic
chr18:12422078(+) A-I      intronic
chr18:12418933(+) A-I      intronic
chr18:12410825(+) A-I      intronic
chr18:12422487(+) A-I      intronic
chr18:12419178(+) A-I      intronic
chr18:12415352(+) A-I      intronic
chr18:12422621(+) A-I      intronic
chr18:12410773(+) A-I      intronic
chr18:12412256(+) A-I      intronic
chr18:12409117(+) A-I      intronic
chr18:12422068(+) A-I      intronic
chr18:12413766(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PRELID3A
chr18:12429377-12429378(+) m6A 3'UTR//CDS       24981863
chr18:12431261-12431262(+) m6A 3'UTR       24284625//25456834//24981863
chr18:12431290-12431291(+) m6A 3'UTR       24284625//25456834//24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hcmv-miR-UL148D
Exosome K562 cells     24460325
PRELID3A
Chromatin K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hcmv-miR-UL148D

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL148D
Interactor2: PRELID3A

Evidence Support:


Prediction-Evidence cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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