Basic Information:

  VIRBase ID:  

VHID00224094

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL148D:  MIMAT0001578          PRDM2:  NM_012231     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL148D	PRDM2
miRBase Accession/Entrez ID	MIMAT0001578	7799
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HUMHOXY1//KMT8//KMT8A//MTB-ZF//RIZ//RIZ1//RIZ2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PRDM2	chr1:14039237(+) A-I      intronic chr1:14094310(+) A-I      intronic chr1:14039213(+) A-I      intronic chr1:14094009(+) A-I      intronic chr1:14093926(+) A-I      intronic chr1:14094030(+) A-I      intronic chr1:14069804(+) A-I      intronic chr1:14068886(+) A-I      intronic chr1:14094039(+) A-I      intronic chr1:14094040(+) A-I      intronic chr1:14040521(+) A-I      intronic chr1:14094048(+) A-I      intronic chr1:14068949(+) A-I      intronic chr1:14145003(+) A-I      intronic chr1:14093912(+) A-I      intronic chr1:14137548(+) A-I      intronic chr1:14040546(+) A-I      intronic chr1:14094195(+) A-I      intronic chr1:14145000(+) A-I      intronic chr1:14094208(+) A-I      intronic chr1:14040549(+) A-I      intronic chr1:14144316(+) A-I      intronic chr1:14040444(+) A-I      intronic chr1:14040571(+) A-I      intronic chr1:14094305(+) A-I      intronic chr1:14094317(+) A-I      intronic chr1:14144233(+) A-I      intronic chr1:14094336(+) A-I      intronic chr1:14094376(+) A-I      intronic chr1:14094949(+) A-I      intronic chr1:14095014(+) A-I      intronic chr1:14137424(+) A-I      intronic chr1:14069717(+) A-I      intronic chr1:14037433(+) A-I      intronic chr1:14037373(+) A-I      intronic chr1:14137425(+) A-I      intronic chr1:14137441(+) A-I      intronic chr1:14037398(+) A-I      intronic chr1:14040493(+) A-I      intronic chr1:14068826(+) A-I      intronic chr1:14137599(+) A-I      intronic chr1:14069801(+) A-I      intronic chr1:14068854(+) A-I      intronic chr1:14137540(+) A-I      intronic chr1:14082491(+) A-I      intronic chr1:14037530(+) A-I      intronic chr1:14094263(+) A-I      intronic chr1:14094069(+) A-I      intronic chr1:14094319(+) A-I      intronic chr1:14137624(+) A-I      intronic chr1:14095041(+) A-I      intronic chr1:14144374(+) A-I      intronic chr1:14137263(+) A-I      intronic chr1:14069639(+) A-I      intronic chr1:14144278(+) A-I      intronic chr1:14094463(+) A-I      intronic chr1:14094359(+) A-I      intronic chr1:14082312(+) A-I      intronic chr1:14037459(+) A-I      intronic chr1:14093851(+) A-I      intronic chr1:14094010(+) A-I      intronic chr1:14094699(+) A-I      intronic chr1:14094974(+) A-I      intronic chr1:14094975(+) A-I      intronic chr1:14094426(+) A-I      intronic chr1:14039097(+) A-I      intronic chr1:14037525(+) A-I      intronic chr1:14039205(+) A-I      intronic chr1:14082492(+) A-I      intronic chr1:14094230(+) A-I      intronic chr1:14094303(+) A-I      intronic chr1:14047189(+) A-I      intronic chr1:14037501(+) A-I      intronic chr1:14094318(+) A-I      intronic chr1:14094930(+) A-I      intronic chr1:14037430(+) A-I      intronic chr1:14095040(+) A-I      intronic chr1:14038612(+) A-I      intronic chr1:14094386(+) A-I      intronic chr1:14094260(+) A-I      intronic chr1:14079566(+) A-I      intronic chr1:14047131(+) A-I      intronic chr1:14093913(+) A-I      intronic chr1:14137422(+) A-I      intronic chr1:14073164(+) A-I      intronic chr1:14145013(+) A-I      intronic chr1:14093899(+) A-I      intronic chr1:14064564(+) A-I      intronic chr1:14094349(+) A-I      intronic chr1:14094327(+) A-I      intronic chr1:14037320(+) A-I      intronic chr1:14047122(+) A-I      intronic chr1:14039134(+) A-I      intronic chr1:14094215(+) A-I      intronic chr1:14093881(+) A-I      intronic chr1:14094290(+) A-I      intronic chr1:14092234(+) A-I      intronic chr1:14094363(+) A-I      intronic chr1:14067321(+) A-I      intronic chr1:14048496(+) A-I      intronic chr1:14094417(+) A-I      intronic chr1:14095107(+) A-I      intronic chr1:14082318(+) A-I      intronic chr1:14039148(+) A-I      intronic chr1:14037750(+) A-I      intronic chr1:14094416(+) A-I      intronic chr1:14048479(+) A-I      intronic chr1:14039131(+) A-I      intronic chr1:14094396(+) A-I      intronic chr1:14095000(+) A-I      intronic chr1:14040644(+) A-I      intronic chr1:14094391(+) A-I      intronic chr1:14072122(+) A-I      intronic chr1:14094647(+) A-I      intronic chr1:14069640(+) A-I      intronic chr1:14094830(+) A-I      intronic chr1:14094307(+) A-I      intronic chr1:14094223(+) A-I      intronic chr1:14094992(+) A-I      intronic chr1:14039074(+) A-I      intronic chr1:14143690(+) A-I      intronic chr1:14068830(+) A-I      intronic chr1:14137600(+) A-I      intronic chr1:14137433(+) A-I      intronic chr1:14137636(+) A-I      intronic chr1:14094237(+) A-I      intronic chr1:14094206(+) A-I      intronic chr1:14039145(+) A-I      intronic chr1:14094242(+) A-I      intronic chr1:14144348(+) A-I      intronic chr1:14095055(+) A-I      intronic chr1:14094220(+) A-I      intronic chr1:14094743(+) A-I      intronic chr1:14072192(+) A-I      intronic chr1:14048501(+) A-I      intronic chr1:14094308(+) A-I      intronic chr1:14095001(+) A-I      intronic chr1:14048529(+) A-I      intronic chr1:14144381(+) A-I      intronic chr1:14094029(+) A-I      intronic chr1:14144275(+) A-I      intronic chr1:14037362(+) A-I      intronic chr1:14094214(+) A-I      intronic chr1:14097977(+) A-I      intronic chr1:14095058(+) A-I      intronic chr1:14048471(+) A-I      intronic chr1:14094306(+) A-I      intronic chr1:14098142(+) A-I      intronic chr1:14137628(+) A-I      intronic chr1:14094243(+) A-I      intronic chr1:14039141(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PRDM2	chr1:14037320(+) A-I intron -    15342557 chr1:14037362(+) A-I intron -    15342557 chr1:14037430(+) A-I intron -    15342557 chr1:14037459(+) A-I intron -    15342557 chr1:14037525(+) A-I intron -    15342557 chr1:14037530(+) A-I intron -    15342557 chr1:14037750(+) A-I intron -    15342557 chr1:14039145(+) A-I intron -    22327324 chr1:14094243(+) A-I intron -    22327324 chr1:14094349(+) A-I intron -    22327324 chr1:14100088(+) A-I intron -    21960545 chr1:14047122(+) A-G intron -    22484847 chr1:14047131(+) A-G intron -    22484847 chr1:14047189(+) A-G intron -    22484847 chr1:14048471(+) A-G intron -    22484847 chr1:14048479(+) A-G intron -    22484847 chr1:14048496(+) A-G intron -    22484847 chr1:14048501(+) A-G intron -    22484847 chr1:14038612(+) A-G intron -    22484847 chr1:14039134(+) A-G intron -    22484847 chr1:14039141(+) A-G intron -    22484847 chr1:14039145(+) A-G intron -    22484847 chr1:14039205(+) A-G intron -    22484847 chr1:14068830(+) A-G intron -    22484847 chr1:14073063(+) A-T intron -    22484847 chr1:14073066(+) T-A intron -    22484847 chr1:14073067(+) T-A intron -    22484847 chr1:14073164(+) A-G intron -    22484847 chr1:14082318(+) A-G intron -    22484847 chr1:14082491(+) A-G intron -    22484847 chr1:14082492(+) A-G intron -    22484847 chr1:14092085(+) T-C intron -    22484847 chr1:14092184(+) G-A intron -    22484847 chr1:14093881(+) A-G intron -    22484847 chr1:14093913(+) A-G intron -    22484847 chr1:14094010(+) A-G intron -    22484847 chr1:14094069(+) A-G intron -    22484847 chr1:14094215(+) A-G intron -    22484847 chr1:14094220(+) A-G intron -    22484847 chr1:14094223(+) A-G intron -    22484847 chr1:14094230(+) A-G intron -    22484847 chr1:14094242(+) A-G intron -    22484847 chr1:14094243(+) A-G intron -    22484847 chr1:14094260(+) A-G intron -    22484847 chr1:14094307(+) A-G intron -    22484847 chr1:14094308(+) A-G intron -    22484847 chr1:14094319(+) A-G intron -    22484847 chr1:14094327(+) A-G intron -    22484847 chr1:14094349(+) A-G intron -    22484847 chr1:14094359(+) A-G intron -    22484847 chr1:14094363(+) A-G intron -    22484847 chr1:14094386(+) A-G intron -    22484847 chr1:14094396(+) A-G intron -    22484847 chr1:14094426(+) A-G intron -    22484847 chr1:14094591(+) G-T intron -    22484847 chr1:14094647(+) A-G intron -    22484847 chr1:14094699(+) A-G intron -    22484847 chr1:14094830(+) A-G intron -    22484847 chr1:14094930(+) A-G intron -    22484847 chr1:14094974(+) A-G intron -    22484847 chr1:14094975(+) A-G intron -    22484847 chr1:14095000(+) A-G intron -    22484847 chr1:14095001(+) A-G intron -    22484847 chr1:14095040(+) A-G intron -    22484847 chr1:14095041(+) A-G intron -    22484847 chr1:14095107(+) A-G intron -    22484847 chr1:14098117(+) C-T intron -    22484847 chr1:14098142(+) A-G intron -    22484847 chr1:14137422(+) A-G intron -    22484847 chr1:14137433(+) A-G intron -    22484847 chr1:14137628(+) A-G intron -    22484847 chr1:14137636(+) A-G intron -    22484847 chr1:14144374(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PRDM2	chr1:14075901-14075902(+) m6A 3'UTR//5'UTR//CDS//exon       24981863 chr1:14095612-14095613(+) m6A 3'UTR//5'UTR//exon//intron       24981863 chr1:14098674-14098675(+) m6A 5'UTR//intron       24981863 chr1:14098680-14098681(+) m6A 5'UTR//intron       24981863 chr1:14099599-14099600(+) m6A 3'UTR//5'UTR//CDS//exon//intron       24209618//24981863 chr1:14099608-14099609(+) m6A 3'UTR//5'UTR//CDS//exon//intron       24209618//24981863 chr1:14099620-14099621(+) m6A 3'UTR//5'UTR//CDS//exon//intron       24209618//24981863 chr1:14099634-14099635(+) m6A 3'UTR//5'UTR//CDS//exon//intron       24209618//24981863 chr1:14105003-14105004(+) m6A CDS//intron       24284625//24981863 chr1:14105042-14105043(+) m6A CDS//intron       24284625//24981863 chr1:14105125-14105126(+) m1A CDS//intron       26863196 chr1:14105134-14105135(+) m1A CDS//intron       26863196 chr1:14105173-14105174(+) m1A CDS//intron       26863196 chr1:14105255-14105256(+) m6A CDS//intron       24981863//27773535//22608085 chr1:14105262-14105263(+) m6A CDS//intron       24981863//27773535//22608085 chr1:14105277-14105278(+) m6A CDS//intron       24981863//22608085 chr1:14105287-14105288(+) m6A CDS//intron       24981863//22608085 chr1:14105325-14105326(+) m6A CDS//intron       24981863//22608085 chr1:14105405-14105406(+) m6A CDS//intron       24284625//24981863//26404942//22608085 chr1:14105546-14105547(+) m6A CDS//intron       24284625//24981863//26404942//22608085 chr1:14105556-14105557(+) m6A CDS//intron       24284625//24981863//26404942//22608085 chr1:14105650-14105651(+) m6A CDS//intron       24284625//24981863//22608085 chr1:14105686-14105687(+) m6A CDS//intron       24284625//24981863//26404942//22608085 chr1:14105732-14105733(+) m6A CDS//intron       24981863//26404942//22608085 chr1:14105769-14105770(+) m6A CDS//intron       24981863//26404942//22608085 chr1:14105876-14105877(+) m6A CDS//intron       24981863//26404942//22608085 chr1:14105959-14105960(+) m6A CDS//intron       24209618//24981863//26404942//22608085 chr1:14105983-14105984(+) m6A CDS//intron       24209618//24981863//26404942//22608085 chr1:14106015-14106016(+) m6A CDS//intron       24209618//24981863//26404942//22608085 chr1:14106132-14106133(+) m6A CDS//intron       24284625//24981863//26404942//22608085 chr1:14106210-14106211(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22608085 chr1:14106249-14106250(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22608085 chr1:14106365-14106366(+) m6A CDS//intron       24284625//24981863//22608085 chr1:14106378-14106379(+) m6A CDS//intron       24284625//22608085 chr1:14106389-14106390(+) m6A CDS//intron       24284625//22608085 chr1:14106498-14106499(+) m6A CDS//intron       24284625//24981863//22608085 chr1:14106544-14106545(+) m6A CDS//intron       24284625//24981863//22608085 chr1:14106579-14106580(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22608085 chr1:14106669-14106670(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22608085 chr1:14106717-14106718(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22608085 chr1:14106782-14106783(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22608085 chr1:14106807-14106808(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22608085 chr1:14106935-14106936(+) m6A CDS//intron       26404942 chr1:14107146-14107147(+) m6A CDS//intron       24284625//24981863 chr1:14107592-14107593(+) m6A CDS//intron       24284625//24981863//22608085 chr1:14107622-14107623(+) m6A CDS//intron       24284625//24981863//22608085 chr1:14107652-14107653(+) m6A CDS//intron       24284625//24209618//24981863//22608085 chr1:14107674-14107675(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22608085 chr1:14107687-14107688(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22608085 chr1:14107742-14107743(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22608085 chr1:14107816-14107817(+) m6A CDS//intron       24284625//24981863//26404942//22608085 chr1:14107826-14107827(+) m6A CDS//intron       24284625//24981863//26404942//22608085 chr1:14107971-14107972(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22608085 chr1:14107987-14107988(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22608085 chr1:14108052-14108053(+) m6A CDS//intron       24284625//24981863//26404942//22608085 chr1:14108133-14108134(+) m6A CDS//intron       24284625//22608085 chr1:14108186-14108187(+) m6A CDS//intron       24284625//24981863//26404942//22608085 chr1:14108271-14108272(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22608085 chr1:14108339-14108340(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22608085 chr1:14108395-14108396(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22608085 chr1:14108411-14108412(+) m6A CDS//intron       24284625//25456834//24981863//26404942//22608085 chr1:14108483-14108484(+) m6A CDS//intron       24284625//25456834//24981863//22608085 chr1:14108599-14108600(+) m6A CDS//intron       24284625//24981863//22608085 chr1:14108705-14108706(+) m6A CDS//intron       24284625//24981863//22608085 chr1:14108732-14108733(+) m6A CDS//intron       24284625//24981863//22608085 chr1:14108783-14108784(+) m6A CDS//intron       24284625//24981863//22608085 chr1:14108812-14108813(+) m6A CDS//intron       24284625//24981863//26404942//22608085 chr1:14108838-14108839(+) m6A CDS//intron       24284625//24981863//26404942//22608085 chr1:14108874-14108875(+) m6A CDS//intron       24284625//24981863//26404942//22608085 chr1:14108889-14108890(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22608085 chr1:14108990-14108991(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22608085 chr1:14109013-14109014(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22608085 chr1:14109062-14109063(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22608085 chr1:14109108-14109109(+) m6A CDS//intron       24284625//24209618//24981863//22608085 chr1:14109189-14109190(+) m6A CDS//intron       24284625//24209618//24981863//22608085 chr1:14109280-14109281(+) m6A CDS//intron       24284625//24209618//24981863//22608085 chr1:14109319-14109320(+) m6A CDS//intron       24284625//24209618//24981863//26404942//22608085 chr1:14113011-14113012(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//22608085 chr1:14113035-14113036(+) m6A 3'UTR//intron       24284625//24209618//24981863//26404942//22608085 chr1:14113040-14113041(+) m6A 3'UTR//intron       24284625//24209618//24981863//26404942//22608085 chr1:14113127-14113128(+) m6A 3'UTR//intron       24284625//24209618//24981863//26404942//22608085 chr1:14113269-14113270(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:14113282-14113283(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:14113301-14113302(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:14113366-14113367(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr1:14113504-14113505(+) m6A 3'UTR//intron       - chr1:14113607-14113608(+) m6A 3'UTR//intron       24981863 chr1:14113623-14113624(+) m6A 3'UTR//intron       24981863 chr1:14113727-14113728(+) m6A 3'UTR//intron       24981863//26404942//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-UL148D	Exosome K562 cells     24460325
	PRDM2	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Insoluble cytoplasm K562 cells     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-UL148D	Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL148D
Interactor2: PRDM2

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg