Detail Information

Basic Information:


  VIRBase ID:  

VHID00223903

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL148D:           POU3F1:      

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Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL148D POU3F1
miRBase
Accession/Entrez ID
MIMAT0001578 5453
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - OCT6//OTF6//SCIP

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase POU3F1
chr1:38510831-38510832(-) m6A 3'UTR       25456834//24981863//27371828//27773536
chr1:38510886-38510887(-) m6A 3'UTR       25456834//24981863//27773536//22608085
chr1:38510920-38510921(-) m6A 3'UTR       25456834//24981863//22608085
chr1:38510925-38510926(-) m6A 3'UTR       25456834//24981863
chr1:38510930-38510931(-) m6A 3'UTR       25456834//24981863
chr1:38510938-38510939(-) m6A 3'UTR       25456834//24981863
chr1:38510991-38510992(-) m6A 3'UTR       25456834//24981863
chr1:38511294-38511295(-) m6A CDS       25456834//24981863//27371828//27773536
chr1:38511423-38511424(-) m6A CDS       25456834//24981863//22608085
chr1:38511457-38511458(-) m6A CDS       25456834//24981863//22608085
chr1:38511501-38511502(-) m6A CDS       25456834//24981863//22608085
chr1:38511544-38511545(-) m6A CDS       25456834//24981863//22608085
chr1:38511767-38511768(-) m6A CDS       25456834//24981863
chr1:38511779-38511780(-) m6A CDS       25456834//24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hcmv-miR-UL148D
Exosome K562 cells     24460325
POU3F1
Exosome Blood     -

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hcmv-miR-UL148D

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL148D
Interactor2: POU3F1

Evidence Support:


Prediction-Evidence miRanda//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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