Detail Information

Basic Information:


  VIRBase ID:  

VHID00223721

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL148D:           IL11:      

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Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL148D IL11
miRBase
Accession/Entrez ID
MIMAT0001578 3589
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - AGIF//IL-11

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR IL11
chr19:55880537(-) A-I      intronic
chr19:55880487(-) A-I      intronic
chr19:55880501(-) A-I      intronic
chr19:55876050(-) A-I      3'UTR
chr19:55876126(-) A-I      3'UTR
chr19:55876451(-) A-I      3'UTR
chr19:55876606(-) A-I      3'UTR

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase IL11
chr19:55876215-55876216(-) m6A 3'UTR       24981863
chr19:55876953-55876954(-) m6A 3'UTR       24981863
chr19:55876960-55876961(-) m6A 3'UTR       24981863
chr19:55877147-55877148(-) m6A 3'UTR       24209618
chr19:55877173-55877174(-) m6A 3'UTR       24209618
chr19:55881697-55881698(-) m6A 5'UTR       24981863
chr19:55881745-55881746(-) m6A 5'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hcmv-miR-UL148D
Exosome K562 cells     24460325
IL11
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Exosome Blood     -
Nucleus Nasopharyngeal carcinoma cells     20498841

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hcmv-miR-UL148D

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL148D
Interactor2: IL11

Evidence Support:


Prediction-Evidence cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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