Detail Information

Basic Information:


  VIRBase ID:  

VHID00223708

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL148D:           ID1:      

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Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL148D ID1
miRBase
Accession/Entrez ID
MIMAT0001578 3397
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - bHLHb24//ID

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ID1
chr20:30193259-30193260(+) m6A CDS       24209618//24981863//22575960
chr20:30193446-30193447(+) m6A CDS       26404942//27773535//22575960
chr20:30193500-30193501(+) m6A CDS       26404942//27773535//22575960
chr20:30193518-30193519(+) m6A CDS       26404942//27773535//22575960
chr20:30193538-30193539(+) m6A CDS       26404942//27773535//22575960
chr20:30193913-30193914(+) m6A 3'UTR       24981863//22575960
chr20:30193921-30193922(+) m6A 3'UTR       24981863//22575960
chr20:30194000-30194001(+) m6A 3'UTR       24284625//24981863//22575960
chr20:30194005-30194006(+) m6A 3'UTR       24284625//24981863//22575960
chr20:30194111-30194112(+) m6A 3'UTR       24284625//24981863//27773535//22575960
chr20:30194161-30194162(+) m6A 3'UTR       24981863//27773535//22575960
chr20:30194294-30194295(+) m6A 3'UTR       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hcmv-miR-UL148D
Exosome K562 cells     24460325
ID1
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleus HeLa-S3 cells|K562 cells     -
Ribosome Colon cancer cells     24393600

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug hcmv-miR-UL148D

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL148D
Interactor2: ID1

Evidence Support:


Prediction-Evidence cRep//miRanda
Support Database RepTar//VmiReg

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