Basic Information:

  VIRBase ID:  

VHID00222874

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL112-3p:  MIMAT0001577          HPS3:  NM_032383     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL112-3p	HPS3
miRBase Accession/Entrez ID	MIMAT0001577	84343
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BLOC2S1//SUTAL

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	HPS3	chr3:148882442(+) A-I      intronic chr3:148889015(+) A-I      intronic chr3:148889715(+) A-I      intronic chr3:148889766(+) A-I      intronic chr3:148859755(+) A-I      intronic chr3:148889547(+) A-I      intronic chr3:148889556(+) A-I      intronic chr3:148888856(+) A-I      intronic chr3:148889631(+) A-I      intronic chr3:148888878(+) A-I      intronic chr3:148888879(+) A-I      intronic chr3:148888889(+) A-I      intronic chr3:148888914(+) A-I      intronic chr3:148888918(+) A-I      intronic chr3:148888971(+) A-I      intronic chr3:148859681(+) A-I      intronic chr3:148889668(+) A-I      intronic chr3:148889674(+) A-I      intronic chr3:148889677(+) A-I      intronic chr3:148889621(+) A-I      intronic chr3:148889562(+) A-I      intronic chr3:148848535(+) A-I      intronic chr3:148889625(+) A-I      intronic chr3:148888950(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HPS3	chr3:148847577-148847578(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr3:148847788-148847789(+) m6A exon//intron       24284625//24209618//22608085 chr3:148847825-148847826(+) m6A exon//intron       24284625//24209618//25456834 chr3:148848028-148848029(+) m6A exon//intron       24284625//24209618//22608085 chr3:148848041-148848042(+) m6A exon//intron       24284625//24209618//22608085 chr3:148848067-148848068(+) m6A exon//intron       24284625//24209618//22608085 chr3:148848080-148848081(+) m6A exon//intron       24284625//24209618//22608085 chr3:148848098-148848099(+) m6A exon//intron       24284625//24209618//22608085 chr3:148848117-148848118(+) m6A exon//intron       24284625//24209618//22608085 chr3:148857820-148857821(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr3:148857850-148857851(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr3:148857867-148857868(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr3:148857874-148857875(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr3:148857917-148857918(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr3:148857940-148857941(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr3:148858012-148858013(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22608085 chr3:148858093-148858094(+) m6A CDS//exon//intron       24981863//27773535//22608085 chr3:148858180-148858181(+) m6A CDS//exon//intron       27773535//22608085 chr3:148858202-148858203(+) m6A CDS//exon//intron       27773535//22608085 chr3:148871362-148871363(+) m6A CDS//exon       26404942 chr3:148871390-148871391(+) m6A CDS//exon       26404942 chr3:148871414-148871415(+) m6A CDS//exon       26404942 chr3:148889906-148889907(+) m6A 3'UTR//CDS       24981863//27773535 chr3:148889912-148889913(+) m6A 3'UTR//CDS       24981863//27773535 chr3:148889996-148889997(+) m6A 3'UTR//CDS       24981863//27773535//22608085 chr3:148890045-148890046(+) m6A 3'UTR       24981863//27773535//22608085 chr3:148890510-148890511(+) m6A 3'UTR       27773535 chr3:148890551-148890552(+) m6A 3'UTR       27773535 chr3:148890982-148890983(+) m6A 3'UTR       24981863//27773535 chr3:148891006-148891007(+) m6A 3'UTR       24981863//27773535 chr3:148891141-148891142(+) m6A 3'UTR       24981863 chr3:148891153-148891154(+) m6A 3'UTR       24981863 chr3:148891230-148891231(+) m6A 3'UTR       27773535 chr3:148891255-148891256(+) m6A 3'UTR       24981863//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	HPS3	Cytosol K562 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL112-3p
Interactor2: HPS3

Evidence Support:

Prediction-Evidence	cRep//Targetscan
Support Database	RepTar//VmiReg