Basic Information:

  VIRBase ID:  

VHID00221386

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL112-3p:  MIMAT0001577          CR2:  NM_001006658     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL112-3p	CR2
miRBase Accession/Entrez ID	MIMAT0001577	1380
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C3DR//CD21//CR//CVID7//SLEB9

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CR2	chr1:207659488(+) A-I      intronic chr1:207652389(+) A-I      intronic chr1:207660732(+) A-I      intronic chr1:207659501(+) A-I      intronic chr1:207660663(+) A-I      intronic chr1:207645323(+) A-I      intronic chr1:207651639(+) A-I      intronic chr1:207652352(+) A-I      intronic chr1:207660731(+) A-I      intronic chr1:207652416(+) A-I      intronic chr1:207652430(+) A-I      intronic chr1:207652431(+) A-I      intronic chr1:207660736(+) A-I      intronic chr1:207652429(+) A-I      intronic chr1:207651629(+) A-I      intronic chr1:207659525(+) A-I      intronic chr1:207659496(+) A-I      intronic chr1:207660701(+) A-I      intronic chr1:207651779(+) A-I      intronic chr1:207651591(+) A-I      intronic chr1:207651666(+) A-I      intronic chr1:207651669(+) A-I      intronic chr1:207652359(+) A-I      intronic chr1:207659526(+) A-I      intronic chr1:207660682(+) A-I      intronic chr1:207660711(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	CR2	chr1:207651666(+) A-I intron -    22327324 chr1:207652359(+) A-I intron -    22327324 chr1:207660711(+) A-I intron -    22327324 chr1:207651591(+) A-G intron -    22484847 chr1:207651639(+) A-G intron -    22484847 chr1:207651666(+) A-G intron -    22484847 chr1:207651669(+) A-G intron -    22484847 chr1:207652359(+) A-G intron -    22484847 chr1:207652389(+) A-G intron -    22484847 chr1:207652416(+) A-G intron -    22484847 chr1:207652429(+) A-G intron -    22484847 chr1:207652430(+) A-G intron -    22484847 chr1:207652431(+) A-G intron -    22484847 chr1:207659496(+) A-G intron -    22484847 chr1:207659501(+) A-G intron -    22484847 chr1:207659525(+) A-G intron -    22484847 chr1:207660701(+) A-G intron -    22484847 chr1:207660711(+) A-G intron -    22484847 chr1:207660731(+) A-G intron -    22484847 chr1:207660732(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CR2	chr1:207648231-207648232(+) m6A CDS       - chr1:207648325-207648326(+) m6A CDS       - chr1:207648403-207648404(+) m6A CDS       - chr1:207648425-207648426(+) m6A CDS       - chr1:207662628-207662629(+) m6A 3'UTR       - chr1:207662682-207662683(+) m6A 3'UTR       - chr1:207662733-207662734(+) m6A 3'UTR       - chr1:207662804-207662805(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CR2	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL112-3p
Interactor2: CR2

Evidence Support:

Prediction-Evidence	cRep//PITA
Support Database	RepTar//VmiReg