Basic Information:

  VIRBase ID:  

VHID00221276

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL36-5p:  MIMAT0001576          TMED7-TICAM2:  NM_001164468     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL36-5p	TMED7-TICAM2
miRBase Accession/Entrez ID	MIMAT0001576	100302736
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MyD88-4//TICAM-2//TICAM2//TIRAP3//TIRP//TRAM

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TMED7-TICAM2	chr5:114918142(-) A-I      intronic chr5:114928691(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TMED7-TICAM2	chr5:114915594-114915595(-) m6A 3'UTR       - chr5:114915687-114915688(-) m6A 3'UTR       24981863//27773535//22608085 chr5:114915700-114915701(-) m6A 3'UTR       24981863//27773535//22608085 chr5:114915760-114915761(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr5:114915878-114915879(-) m6A 3'UTR       24209618//24981863//27773535//22608085 chr5:114915931-114915932(-) m6A 3'UTR       24209618//24981863//27773535//22608085 chr5:114915944-114915945(-) m6A 3'UTR       24209618//24981863//27773535//22608085 chr5:114915950-114915951(-) m6A 3'UTR       24981863//27773535//22608085 chr5:114915957-114915958(-) m6A 3'UTR       24981863//27773535//22608085 chr5:114916028-114916029(-) m6A 3'UTR       24981863//27773535//22608085 chr5:114916053-114916054(-) m6A 3'UTR       24981863//27773535//22608085 chr5:114916093-114916094(-) m6A 3'UTR       24209618//24981863//27773535//22608085 chr5:114916128-114916129(-) m6A 3'UTR       24209618//24981863//27773535//22608085 chr5:114916205-114916206(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr5:114916238-114916239(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr5:114916260-114916261(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22608085 chr5:114916280-114916281(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22608085 chr5:114916295-114916296(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22608085 chr5:114916304-114916305(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22608085 chr5:114916382-114916383(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr5:114916400-114916401(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr5:114916423-114916424(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr5:114916477-114916478(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr5:114916528-114916529(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085 chr5:114916550-114916551(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085 chr5:114916596-114916597(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085 chr5:114916632-114916633(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//22575960//22608085 chr5:114937933-114937934(-) m6A intron       27773536 chr5:114938150-114938151(-) m6A intron       26404942 chr5:114950536-114950537(-) m6A intron       26404942 chr5:114951186-114951187(-) m6A intron       26404942//27773535 chr5:114951224-114951225(-) m6A intron       26404942//27773535 chr5:114951273-114951274(-) m6A intron       27773535 chr5:114951319-114951320(-) m6A intron       27773535 chr5:114951347-114951348(-) m6A intron       27773535 chr5:114951474-114951475(-) m6A intron       27773535 chr5:114951488-114951489(-) m6A intron       27773535 chr5:114951545-114951546(-) Y intron       25219674 chr5:114951554-114951555(-) m6A intron       27773535 chr5:114951588-114951589(-) m6A intron       24981863//26404942//27773535 chr5:114951622-114951623(-) m6A intron       24209618//24981863//26404942//27773535//22608085 chr5:114951708-114951709(-) m6A intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr5:114951716-114951717(-) m6A intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr5:114951746-114951747(-) m6A intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr5:114951758-114951759(-) m6A intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr5:114951831-114951832(-) m6A intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr5:114951931-114951932(-) m6A intron       24284625//24209618//24981863//26404942//22608085 chr5:114952084-114952085(-) m6A CDS//exon       24284625//24981863//26404942 chr5:114956153-114956154(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//22608085 chr5:114956177-114956178(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr5:114956208-114956209(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr5:114956256-114956257(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr5:114956296-114956297(-) m6A CDS       24284625//24981863//26404942//27773535//22608085 chr5:114961334-114961335(-) m6A CDS       24284625//27773535 chr5:114961399-114961400(-) m6A CDS       27773536 chr5:114961539-114961540(-) m6A 5'UTR       27773536//22575960 chr5:114961609-114961610(-) m6A 5'UTR       24284625//24981863//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-UL36-5p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	TMED7-TICAM2	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL36-5p
Interactor2: TMED7-TICAM2

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg