Basic Information:

  VIRBase ID:  

VHID00221271

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL36-5p:  MIMAT0001576          TMEM236:  NM_001098844     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL36-5p	TMEM236
miRBase Accession/Entrez ID	MIMAT0001576	653567
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	bA162I21.2//bA16O1.2//FAM23A//FAM23B

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TMEM236	chr10:17798516(+) A-I      intronic chr10:17798480(+) A-I      intronic chr10:17798469(+) A-I      intronic chr10:17798478(+) A-I      intronic chr10:17801902(+) A-I      intronic chr10:17801894(+) A-I      intronic chr10:18087401(+) A-I      3'UTR chr10:18087359(+) A-I      3'UTR chr10:18087417(+) A-I      3'UTR chr10:18088522(+) A-I      3'UTR

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-UL36-5p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	TMEM236	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL36-5p
Interactor2: TMEM236

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg