Detail Information

Basic Information:


  VIRBase ID:  

VHID00221260

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL36-5p:           KLHL31:      

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Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL36-5p KLHL31
miRBase
Accession/Entrez ID		 MIMAT0001576 401265
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - bA345L23.2//BKLHD6//KBTBD1//KLHL

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR KLHL31
chr6:53520684(-) A-I      intronic
chr6:53521912(-) A-I      intronic
chr6:53520572(-) A-I      intronic
chr6:53521931(-) A-I      intronic
chr6:53520587(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase KLHL31
chr6:53515462-53515463(-) m6A 3'UTR       27773535
chr6:53515528-53515529(-) m6A 3'UTR       27773535
chr6:53516365-53516366(-) m6A 3'UTR       -
chr6:53516565-53516566(-) m1A CDS       26863196
chr6:53516807-53516808(-) m6A CDS       25456834
chr6:53518949-53518950(-) m6A CDS       27773535
chr6:53519051-53519052(-) m6A CDS       27773535
chr6:53519066-53519067(-) m6A CDS       27773535
chr6:53519145-53519146(-) m6A CDS       27773535
chr6:53519165-53519166(-) m6A CDS       27773535
chr6:53519192-53519193(-) m6A CDS       27773535
chr6:53519212-53519213(-) m6A CDS       27773535
chr6:53519270-53519271(-) m6A CDS       27773535
chr6:53519756-53519757(-) m6A CDS       27773535
chr6:53519829-53519830(-) m6A CDS       27773535
chr6:53519861-53519862(-) m6A CDS       27773535
chr6:53519923-53519924(-) m6A CDS       27773535
chr6:53519987-53519988(-) m6A CDS       27773535
chr6:53520038-53520039(-) m6A CDS       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hcmv-miR-UL36-5p
Exosome Jurkat-derived T cell line (J77cl20)     21505438
KLHL31
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL36-5p
Interactor2: KLHL31

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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