Basic Information:

  VIRBase ID:  

VHID00221259

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL36-5p:  MIMAT0001576          MEX3D:  NM_001174118     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL36-5p	MEX3D
miRBase Accession/Entrez ID	MIMAT0001576	399664
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MEX-3D//MEX3//OK/SW-cl.4//RKHD1//RNF193//TINO

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MEX3D	chr19:1565459(-) A-I      intronic chr19:1562905(-) A-I      intronic chr19:1565458(-) A-I      intronic chr19:1565455(-) A-I      intronic chr19:1558331(-) A-I      intronic chr19:1558357(-) A-I      intronic chr19:1558358(-) A-I      intronic chr19:1561735(-) A-I      intronic chr19:1561787(-) A-I      intronic chr19:1558155(-) A-I      intronic chr19:1561719(-) A-I      intronic chr19:1563918(-) A-I      intronic chr19:1562917(-) A-I      intronic chr19:1563909(-) A-I      intronic chr19:1564449(-) A-I      intronic chr19:1562941(-) A-I      intronic chr19:1558105(-) A-I      intronic chr19:1563976(-) A-I      intronic chr19:1561781(-) A-I      intronic chr19:1562922(-) A-I      intronic chr19:1564410(-) A-I      intronic chr19:1565429(-) A-I      intronic chr19:1561918(-) A-I      intronic chr19:1562017(-) A-I      intronic chr19:1563945(-) A-I      intronic chr19:1563849(-) A-I      intronic chr19:1558248(-) A-I      intronic chr19:1561771(-) A-I      intronic chr19:1564366(-) A-I      intronic chr19:1562934(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MEX3D	chr19:1554801-1554802(-) m6A 3'UTR       27773535 chr19:1554835-1554836(-) m6A 3'UTR       27773535 chr19:1555215-1555216(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr19:1555222-1555223(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr19:1555260-1555261(-) m6A 3'UTR       24284625//24209618//27773535//27371828//22608085 chr19:1555310-1555311(-) m6A 3'UTR       24284625//24209618//24981863//27773535 chr19:1555373-1555374(-) m6A 3'UTR//CDS       24284625//24209618//24981863 chr19:1555493-1555494(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863 chr19:1555553-1555554(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr19:1555649-1555650(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr19:1555769-1555770(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr19:1555787-1555788(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr19:1555910-1555911(-) m6A CDS       24209618//25456834//24981863//27371828//27773536//22575960 chr19:1555989-1555990(-) m6A CDS       24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr19:1556029-1556030(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr19:1556129-1556130(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr19:1556267-1556268(-) m6A CDS       24209618//25456834//24981863//27371828//27773536//22575960 chr19:1556339-1556340(-) m6A CDS       24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr19:1556391-1556392(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr19:1556426-1556427(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr19:1556520-1556521(-) Gm CDS       - chr19:1556534-1556535(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr19:1556701-1556702(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr19:1556782-1556783(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr19:1556874-1556875(-) m6A CDS       24284625//24209618//27371828//27773536 chr19:1556892-1556893(-) m6A CDS       24284625//24209618//27371828//27773536 chr19:1567674-1567675(-) m6A CDS       24209618//24981863//27371828//27773536 chr19:1567739-1567740(-) m6A CDS       24209618//25456834//24981863//27371828//27773536 chr19:1567866-1567867(-) m6A CDS       24209618//25456834//27371828//27773536 chr19:1567904-1567905(-) m6A CDS       24209618//25456834//27371828//27773536 chr19:1567964-1567965(-) m6A CDS       24209618

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-UL36-5p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	MEX3D	Chromatin K562 cells     - Exosome Blood     - Ribosome-free cytosol Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL36-5p
Interactor2: MEX3D

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg