Detail

Basic Information:

VIRBase ID:

VHID00221253

Virus:

Human betaherpesvirus 5 (HHV-5)

Host:

Homo sapiens

Confidence Score:

0.2202

Interaction Type:

Virus-Host interaction

Predicted Binding:

*It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL36-5p	SHISA2
miRBase Accession/Entrez ID	MIMAT0001576	387914
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	bA398O19.2//C13orf13//hShisa//PRO28631//TMEM46//WGAR9166

RNA Modification:

Resource

Symbol

ModificationPosition

Type

Genomic Context

PMID

RMBase

SHISA2

chr13:26620345-26620346(-)	m6A	3'UTR	24981863//22608085
chr13:26620447-26620448(-)	m6A	3'UTR	24981863//22608085
chr13:26620510-26620511(-)	m6A	3'UTR	25456834//24981863//22608085
chr13:26620521-26620522(-)	m6A	3'UTR	25456834//24981863//22608085
chr13:26620680-26620681(-)	m6A	CDS	24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr13:26620855-26620856(-)	m6A	CDS	24284625//25456834//24981863//27371828//22608085
chr13:26620897-26620898(-)	m6A	CDS	24284625//25456834//24981863//27371828//22608085
chr13:26620904-26620905(-)	m6A	CDS	24284625//25456834//24981863//27371828//22608085
chr13:26620928-26620929(-)	m6A	CDS	24284625//25456834//24981863//27371828//22608085
chr13:26621051-26621052(-)	m6A	CDS	24284625//22608085
chr13:26624862-26624863(-)	m6A	CDS	27773536
chr13:26625161-26625162(-)	m6A	5'UTR	27773536

RNA Localization:

Resource

Symbol

Subcellular Localization

Tissue or Cell Line

PMID

RNALocate

hcmv-miR-UL36-5p

Exosome

Jurkat-derived T cell line (J77cl20)

21505438