Detail Information

Basic Information:


  VIRBase ID:  

VHID00221040

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL36-5p:           FOXJ3:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL36-5p FOXJ3
miRBase
Accession/Entrez ID		 MIMAT0001576 22887
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR FOXJ3
chr1:42793814(-) A-I      intronic
chr1:42794554(-) A-I      intronic
chr1:42794503(-) A-I      intronic
chr1:42793942(-) A-I      intronic
chr1:42794476(-) A-I      intronic
chr1:42794551(-) A-I      intronic
chr1:42796970(-) A-I      intronic
chr1:42677096(-) A-I      intronic
chr1:42796958(-) A-I      intronic
chr1:42767038(-) A-I      intronic
chr1:42692071(-) A-I      intronic
chr1:42648433(-) A-I      intronic
chr1:42648703(-) A-I      intronic
chr1:42662983(-) A-I      intronic
chr1:42765470(-) A-I      intronic
chr1:42796241(-) A-I      intronic
chr1:42662993(-) A-I      intronic
chr1:42753631(-) A-I      intronic
chr1:42753434(-) A-I      intronic
chr1:42767138(-) A-I      intronic
chr1:42648789(-) A-I      intronic
chr1:42648254(-) A-I      intronic
chr1:42648183(-) A-I      intronic
chr1:42648812(-) A-I      intronic
chr1:42652527(-) A-I      intronic
chr1:42662286(-) A-I      intronic
chr1:42752924(-) A-I      intronic
chr1:42672747(-) A-I      intronic
chr1:42662288(-) A-I      intronic
chr1:42702790(-) A-I      intronic
chr1:42702853(-) A-I      intronic
chr1:42796201(-) A-I      intronic
chr1:42796197(-) A-I      intronic
chr1:42796058(-) A-I      intronic
chr1:42794537(-) A-I      intronic
chr1:42794444(-) A-I      intronic
chr1:42794389(-) A-I      intronic
chr1:42793827(-) A-I      intronic
chr1:42765496(-) A-I      intronic
chr1:42793794(-) A-I      intronic
chr1:42793771(-) A-I      intronic
chr1:42784289(-) A-I      intronic
chr1:42784232(-) A-I      intronic
chr1:42784219(-) A-I      intronic
chr1:42784217(-) A-I      intronic
chr1:42784110(-) A-I      intronic
chr1:42778789(-) A-I      intronic
chr1:42778024(-) A-I      intronic
chr1:42777975(-) A-I      intronic
chr1:42648204(-) A-I      intronic
chr1:42767086(-) A-I      intronic
chr1:42767076(-) A-I      intronic
chr1:42752911(-) A-I      intronic
chr1:42752899(-) A-I      intronic
chr1:42702963(-) A-I      intronic
chr1:42728293(-) A-I      intronic
chr1:42737412(-) A-I      intronic
chr1:42752415(-) A-I      intronic
chr1:42752442(-) A-I      intronic
chr1:42752478(-) A-I      intronic
chr1:42767066(-) A-I      intronic
chr1:42767060(-) A-I      intronic
chr1:42767031(-) A-I      intronic
chr1:42766391(-) A-I      intronic
chr1:42765788(-) A-I      intronic
chr1:42765752(-) A-I      intronic
chr1:42648372(-) A-I      intronic
chr1:42648363(-) A-I      intronic
chr1:42648357(-) A-I      intronic
chr1:42648348(-) A-I      intronic
chr1:42648347(-) A-I      intronic
chr1:42648306(-) A-I      intronic
chr1:42648382(-) A-I      intronic
chr1:42648401(-) A-I      intronic
chr1:42648417(-) A-I      intronic
chr1:42648702(-) A-I      intronic
chr1:42766253(-) A-I      intronic
chr1:42752889(-) A-I      intronic
chr1:42766254(-) A-I      intronic
chr1:42791653(-) A-I      intronic
chr1:42702086(-) A-I      intronic
chr1:42648729(-) A-I      intronic
chr1:42794434(-) A-I      intronic
chr1:42796064(-) A-I      intronic
chr1:42766274(-) A-I      intronic
chr1:42793695(-) A-I      intronic
chr1:42761328(-) A-I      intronic
chr1:42666383(-) A-I      intronic
chr1:42766275(-) A-I      intronic
chr1:42648320(-) A-I      intronic
chr1:42784667(-) A-I      intronic
chr1:42775955(-) A-I      intronic
chr1:42767004(-) A-I      intronic
chr1:42796138(-) A-I      intronic
chr1:42648799(-) A-I      intronic
chr1:42648835(-) A-I      intronic
chr1:42701451(-) A-I      intronic
chr1:42752902(-) A-I      intronic
chr1:42752844(-) A-I      intronic
chr1:42663554(-) A-I      intronic
chr1:42766372(-) A-I      intronic
chr1:42794609(-) A-I      intronic
chr1:42648396(-) A-I      intronic
chr1:42702902(-) A-I      intronic
chr1:42648803(-) A-I      intronic
chr1:42796240(-) A-I      intronic
chr1:42728372(-) A-I      intronic
chr1:42765357(-) A-I      intronic
chr1:42766229(-) A-I      intronic
chr1:42648783(-) A-I      intronic
chr1:42701960(-) A-I      intronic
chr1:42672630(-) A-I      intronic
chr1:42752949(-) A-I      intronic
chr1:42648362(-) A-I      intronic
chr1:42704441(-) A-I      intronic
chr1:42794539(-) A-I      intronic
chr1:42778840(-) A-I      intronic
chr1:42710065(-) A-I      intronic
chr1:42648251(-) A-I      intronic
chr1:42648226(-) A-I      intronic
chr1:42784645(-) A-I      intronic
chr1:42648351(-) A-I      intronic
chr1:42766982(-) A-I      intronic
chr1:42794449(-) A-I      intronic
chr1:42778008(-) A-I      intronic
chr1:42793946(-) A-I      intronic
chr1:42648216(-) A-I      intronic
chr1:42784124(-) A-I      intronic
chr1:42766281(-) A-I      intronic
chr1:42784080(-) A-I      intronic
chr1:42737528(-) A-I      intronic
chr1:42672551(-) A-I      intronic
chr1:42702002(-) A-I      intronic
chr1:42775890(-) A-I      intronic
chr1:42794533(-) A-I      intronic
chr1:42648864(-) A-I      intronic
chr1:42737419(-) A-I      intronic
chr1:42781869(-) A-I      intronic
chr1:42793884(-) A-I      intronic
chr1:42784844(-) A-I      intronic
chr1:42794508(-) A-I      intronic
chr1:42648851(-) A-I      intronic
chr1:42710063(-) A-I      intronic
chr1:42752989(-) A-I      intronic
chr1:42753010(-) A-I      intronic
chr1:42752381(-) A-I      intronic
chr1:42793858(-) A-I      intronic
chr1:42784806(-) A-I      intronic
chr1:42794619(-) A-I      intronic
chr1:42778740(-) A-I      intronic
chr1:42692026(-) A-I      intronic
chr1:42648807(-) A-I      intronic
chr1:42784779(-) A-I      intronic
chr1:42766366(-) A-I      intronic
chr1:42793702(-) A-I      intronic
chr1:42793885(-) A-I      intronic
chr1:42767140(-) A-I      intronic
chr1:42742608(-) A-I      intronic
chr1:42794502(-) A-I      intronic
chr1:42648901(-) A-I      intronic
chr1:42648234(-) A-I      intronic
chr1:42648441(-) A-I      intronic
chr1:42793804(-) A-I      intronic
chr1:42761321(-) A-I      intronic
chr1:42767160(-) A-I      intronic
chr1:42648415(-) A-I      intronic
chr1:42793803(-) A-I      intronic
chr1:42766235(-) A-I      intronic
chr1:42648442(-) A-I      intronic
chr1:42648689(-) A-I      intronic
chr1:42752767(-) A-I      intronic
chr1:42766445(-) A-I      intronic
chr1:42794380(-) A-I      intronic
chr1:42703868(-) A-I      intronic
chr1:42790186(-) A-I      intronic
chr1:42793723(-) A-I      intronic
chr1:42703801(-) A-I      intronic
chr1:42752929(-) A-I      intronic
chr1:42794610(-) A-I      intronic
chr1:42793961(-) A-I      intronic
chr1:42794494(-) A-I      intronic
chr1:42701427(-) A-I      intronic
chr1:42796143(-) A-I      intronic
chr1:42648754(-) A-I      intronic
chr1:42648883(-) A-I      intronic
chr1:42782114(-) A-I      intronic
chr1:42781874(-) A-I      intronic
chr1:42778749(-) A-I      intronic
chr1:42766340(-) A-I      intronic
chr1:42741230(-) A-I      intronic
chr1:42793964(-) A-I      intronic
chr1:42672965(-) A-I      intronic
chr1:42648687(-) A-I      intronic
chr1:42784109(-) A-I      intronic
chr1:42702774(-) A-I      intronic
chr1:42742627(-) A-I      intronic
chr1:42796105(-) A-I      intronic
chr1:42701442(-) A-I      intronic
chr1:42778886(-) A-I      intronic
chr1:42714012(-) A-I      intronic
chr1:42701646(-) A-I      intronic
chr1:42648701(-) A-I      intronic
chr1:42648342(-) A-I      intronic
chr1:42702879(-) A-I      intronic
chr1:42793906(-) A-I      intronic
chr1:42793966(-) A-I      intronic
chr1:42766327(-) A-I      intronic
chr1:42648908(-) A-I      intronic
chr1:42778018(-) A-I      intronic
chr1:42767111(-) A-I      intronic
chr1:42793861(-) A-I      intronic
chr1:42714503(-) A-I      intronic
chr1:42648774(-) A-I      intronic
chr1:42752469(-) A-I      intronic
chr1:42761368(-) A-I      intronic
chr1:42648825(-) A-I      intronic
chr1:42784757(-) A-I      intronic
chr1:42701438(-) A-I      intronic
chr1:42648241(-) A-I      intronic
chr1:42793795(-) A-I      intronic
chr1:42752433(-) A-I      intronic
chr1:42752484(-) A-I      intronic
chr1:42703922(-) A-I      intronic
chr1:42758736(-) A-I      intronic
chr1:42780060(-) A-I      intronic
chr1:42672681(-) A-I      intronic
chr1:42780165(-) A-I      intronic
chr1:42648780(-) A-I      intronic
chr1:42701269(-) A-I      intronic
chr1:42780059(-) A-I      intronic
chr1:42794453(-) A-I      intronic
chr1:42755747(-) A-I      intronic
chr1:42793845(-) A-I      intronic
chr1:42756477(-) A-I      intronic
chr1:42778002(-) A-I      intronic
chr1:42796214(-) A-I      intronic
chr1:42793905(-) A-I      intronic
chr1:42755746(-) A-I      intronic
chr1:42784867(-) A-I      intronic
chr1:42756480(-) A-I      intronic
chr1:42663588(-) A-I      intronic
chr1:42784145(-) A-I      intronic
chr1:42648364(-) A-I      intronic
chr1:42776215(-) A-I      intronic
chr1:42755801(-) A-I      intronic
chr1:42672612(-) A-I      intronic
chr1:42776256(-) A-I      intronic
chr1:42648886(-) A-I      intronic
chr1:42703972(-) A-I      intronic
chr1:42784150(-) A-I      intronic
chr1:42703738(-) A-I      intronic
chr1:42778010(-) A-I      intronic
chr1:42752782(-) A-I      intronic
chr1:42672586(-) A-I      intronic
chr1:42648261(-) A-I      intronic
chr1:42702857(-) A-I      intronic
chr1:42793724(-) A-I      intronic
chr1:42648880(-) A-I      intronic
chr1:42648329(-) A-I      intronic
chr1:42752997(-) A-I      intronic
chr1:42760238(-) A-I      intronic
chr1:42704282(-) A-I      intronic
chr1:42669501(-) A-I      intronic
chr1:42766435(-) A-I      intronic
chr1:42784288(-) A-I      intronic
chr1:42651136(-) A-I      intronic
chr1:42703844(-) A-I      intronic
chr1:42772152(-) A-I      intronic
chr1:42648870(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED FOXJ3
chr1:42702109(-) A-I intron -    21960545
chr1:42766340(-) A-I intron -    21960545
chr1:42648226(-) A-G intron -    22484847
chr1:42648251(-) A-G intron -    22484847
chr1:42648261(-) A-G intron -    22484847
chr1:42648351(-) A-G intron -    22484847
chr1:42648362(-) A-G intron -    22484847
chr1:42648364(-) A-G intron -    22484847
chr1:42648415(-) A-G intron -    22484847
chr1:42648701(-) A-G intron -    22484847
chr1:42648729(-) A-G intron -    22484847
chr1:42648774(-) A-G intron -    22484847
chr1:42648780(-) A-G intron -    22484847
chr1:42648783(-) A-G intron -    22484847
chr1:42648803(-) A-G intron -    22484847
chr1:42648807(-) A-G intron -    22484847
chr1:42648851(-) A-G intron -    22484847
chr1:42648883(-) A-G intron -    22484847
chr1:42648886(-) A-G intron -    22484847
chr1:42648908(-) A-G intron -    22484847
chr1:42669501(-) A-G intron -    22484847
chr1:42702002(-) A-G intron -    22484847
chr1:42702086(-) A-G intron -    22484847
chr1:42702774(-) A-G intron -    22484847
chr1:42702857(-) A-G intron -    22484847
chr1:42702879(-) A-G intron -    22484847
chr1:42702902(-) A-G intron -    22484847
chr1:42703801(-) A-G intron -    22484847
chr1:42703844(-) A-G intron -    22484847
chr1:42703868(-) A-G intron -    22484847
chr1:42703972(-) A-G intron -    22484847
chr1:42721592(-) G-A intron -    22484847
chr1:42742608(-) A-G intron -    22484847
chr1:42752469(-) A-G intron -    22484847
chr1:42752484(-) A-G intron -    22484847
chr1:42752767(-) A-G intron -    22484847
chr1:42752782(-) A-G intron -    22484847
chr1:42752844(-) A-G intron -    22484847
chr1:42752889(-) A-G intron -    22484847
chr1:42752902(-) A-G intron -    22484847
chr1:42752929(-) A-G intron -    22484847
chr1:42752949(-) A-G intron -    22484847
chr1:42752989(-) A-G intron -    22484847
chr1:42752997(-) A-G intron -    22484847
chr1:42753010(-) A-G intron -    22484847
chr1:42758538(-) T-C intron -    22484847
chr1:42760238(-) A-G intron -    22484847
chr1:42760448(-) T-C intron -    22484847
chr1:42765357(-) A-G intron -    22484847
chr1:42766229(-) A-G intron -    22484847
chr1:42766235(-) A-G intron -    22484847
chr1:42766253(-) A-G intron -    22484847
chr1:42766254(-) A-G intron -    22484847
chr1:42766274(-) A-G intron -    22484847
chr1:42766275(-) A-G intron -    22484847
chr1:42766327(-) A-G intron -    22484847
chr1:42766340(-) A-G intron -    22484847
chr1:42766366(-) A-G intron -    22484847
chr1:42766372(-) A-G intron -    22484847
chr1:42766435(-) A-G intron -    22484847
chr1:42778008(-) A-G intron -    22484847
chr1:42784124(-) A-G intron -    22484847
chr1:42784145(-) A-G intron -    22484847
chr1:42784150(-) A-G intron -    22484847
chr1:42784288(-) A-G intron -    22484847
chr1:42784779(-) A-G intron -    22484847
chr1:42784844(-) A-G intron -    22484847
chr1:42793845(-) A-G intron -    22484847
chr1:42794434(-) A-G intron -    22484847
chr1:42794494(-) A-G intron -    22484847
chr1:42794508(-) A-G intron -    22484847
chr1:42794610(-) A-G intron -    22484847
chr1:42796064(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase FOXJ3
chr1:42642672-42642673(-) m6A 3'UTR       27773535
chr1:42642682-42642683(-) m6A 3'UTR       27773535
chr1:42642715-42642716(-) m6A 3'UTR       27773535
chr1:42642748-42642749(-) m6A 3'UTR       27773535
chr1:42642817-42642818(-) m6A 3'UTR       27773535
chr1:42645083-42645084(-) m6A 3'UTR       24284625//24209618//27773535
chr1:42645248-42645249(-) m6A 3'UTR       24284625//24209618//24981863//27773535//27371828//22608085
chr1:42645292-42645293(-) m6A 3'UTR       24981863
chr1:42645296-42645297(-) m6A 3'UTR       24284625//24209618//24981863//27773535//27371828//22608085
chr1:42645356-42645357(-) m6A 3'UTR       24284625//24209618//24981863//27773535//27371828//22608085
chr1:42645363-42645364(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//27371828//22608085
chr1:42645477-42645478(-) m6A CDS       24209618//27773535//27371828
chr1:42647599-42647600(-) m6A CDS       24209618//27773535
chr1:42654410-42654411(-) m6A CDS       27773535
chr1:42654429-42654430(-) m6A CDS       27773535
chr1:42657038-42657039(-) m6A CDS       24284625//24981863//27773535//27371828
chr1:42657380-42657381(-) m6A CDS       24981863//27773535
chr1:42660658-42660659(-) m6A CDS       24981863//27773535
chr1:42664803-42664804(-) m6A CDS       27773535
chr1:42664830-42664831(-) m6A CDS       27773535
chr1:42671641-42671642(-) m6A 5'UTR//intron       27773535
chr1:42693617-42693618(-) m6A CDS       27773535
chr1:42730626-42730627(-) m6A 3'UTR//intron       27773535
chr1:42730695-42730696(-) m6A 3'UTR//intron       27773535
chr1:42730719-42730720(-) m6A 3'UTR//intron       27773535
chr1:42730831-42730832(-) m6A CDS       22608085
chr1:42744153-42744154(-) m6A CDS       24284625//24981863//26404942//27773535//22608085
chr1:42744187-42744188(-) m6A CDS       24284625//24981863//27773535//22608085
chr1:42744236-42744237(-) m6A CDS       24284625//24981863//27773535//22575960//22608085
chr1:42744304-42744305(-) m6A CDS       24284625//24981863//27773535//22575960//22608085
chr1:42744330-42744331(-) m6A CDS       24981863//27773535//22575960//22608085
chr1:42776749-42776750(-) m6A CDS       27773535//22575960//22608085
chr1:42800803-42800804(-) m6A 5'UTR//intron       24981863
chr1:42801109-42801110(-) m6A intron       25456834//22608085
chr1:42801126-42801127(-) m6A intron       25456834//22608085
chr1:42801430-42801431(-) m6A 5'UTR       25456834//24981863
chr1:42801450-42801451(-) m6A 5'UTR       25456834//24981863
chr1:42801476-42801477(-) m6A 5'UTR       25456834//24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hcmv-miR-UL36-5p
Exosome Jurkat-derived T cell line (J77cl20)     21505438
FOXJ3
Chromatin K562 cells     -
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Membrane HCC cell line (HepG2)|K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL36-5p
Interactor2: FOXJ3

Evidence Support:


Prediction-Evidence miRanda//PITA//Targetscan
Support Database VmiReg

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