Basic Information:

  VIRBase ID:  

VHID00220937

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL36-5p:  MIMAT0001576          PTGER3:  NR_028293     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL36-5p	PTGER3
miRBase Accession/Entrez ID	MIMAT0001576	5733
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	EP3//EP3-I//EP3-II//EP3-III//EP3-IV//EP3-VI//EP3e//lnc003875//PGE2-R

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PTGER3	chr1:71345038(-) A-I      intronic chr1:71345033(-) A-I      intronic chr1:71447274(-) A-I      intronic chr1:71447291(-) A-I      intronic chr1:71447300(-) A-I      intronic chr1:71447312(-) A-I      intronic chr1:71345013(-) A-I      intronic chr1:71345027(-) A-I      intronic chr1:71345050(-) A-I      intronic chr1:71345118(-) A-I      intronic chr1:71345124(-) A-I      intronic chr1:71345067(-) A-I      intronic chr1:71345126(-) A-I      intronic chr1:71345133(-) A-I      intronic chr1:71345729(-) A-I      intronic chr1:71376194(-) A-I      intronic chr1:71447180(-) A-I      intronic chr1:71447271(-) A-I      intronic chr1:71447364(-) A-I      intronic chr1:71345203(-) A-I      intronic chr1:71447305(-) A-I      intronic chr1:71345728(-) A-I      intronic chr1:71345718(-) A-I      intronic chr1:71462698(-) A-I      intronic chr1:71345045(-) A-I      intronic chr1:71345692(-) A-I      intronic chr1:71345190(-) A-I      intronic chr1:71447139(-) A-I      intronic chr1:71425037(-) A-I      intronic chr1:71345763(-) A-I      intronic chr1:71456032(-) A-I      intronic chr1:71345206(-) A-I      intronic chr1:71345519(-) A-I      intronic chr1:71502384(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PTGER3	chr1:71512605-71512606(-) m6A CDS       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-UL36-5p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	PTGER3	Cytosol K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL36-5p
Interactor2: PTGER3

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg