Basic Information:

  VIRBase ID:  

VHID00220905

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL36-5p:  MIMAT0001576          HLA-DPB1:  NM_002121     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL36-5p	HLA-DPB1
miRBase Accession/Entrez ID	MIMAT0001576	3115
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DPB1//HLA-DP//HLA-DP1B//HLA-DPB

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	HLA-DPB1	chr6:33051515(+) A-I      ncRNA chr6:33051434(+) A-I      ncRNA

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HLA-DPB1	chr6:33043712-33043713(+) m6A 5'UTR       - chr6:33043744-33043745(+) m6A 5'UTR       - chr6:33043851-33043852(+) m6A CDS//exon       - chr6:33048170-33048171(+) m6A exon//intron       - chr6:33048265-33048266(+) m6A CDS//exon//intron       - chr6:33048298-33048299(+) m6A CDS//exon//intron       - chr6:33048306-33048307(+) m6A CDS//exon//intron       - chr6:33048322-33048323(+) m6A exon//intron       - chr6:33048613-33048614(+) m6A CDS//exon       - chr6:33048625-33048626(+) m6A CDS//exon       - chr6:33048655-33048656(+) m6A CDS//exon       - chr6:33048668-33048669(+) m6A CDS//exon       - chr6:33048798-33048799(+) m6A exon//intron       - chr6:33048822-33048823(+) m6A exon//intron       25456834 chr6:33048885-33048886(+) m6A exon//intron       - chr6:33048891-33048892(+) m6A exon//intron       - chr6:33048931-33048932(+) m6A exon//intron       - chr6:33048940-33048941(+) m6A exon//intron       - chr6:33048995-33048996(+) m6A exon//intron       - chr6:33053584-33053585(+) m6A CDS       - chr6:33054015-33054016(+) m6A 3'UTR//CDS       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-UL36-5p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	HLA-DPB1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL36-5p
Interactor2: HLA-DPB1

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg