Detail Information

Basic Information:


  VIRBase ID:  

VHID00220877

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL36-5p:           RUNX1T1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL36-5p RUNX1T1
miRBase
Accession/Entrez ID		 MIMAT0001576 862
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - AML1-MTG8//AML1T1//CBFA2T1//CDR//ETO//MTG8//ZMYND2

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR RUNX1T1
chr8:93054783(-) A-I      intronic
chr8:93054746(-) A-I      intronic
chr8:93054644(-) A-I      intronic
chr8:93054634(-) A-I      intronic
chr8:93007953(-) A-I      intronic
chr8:93054620(-) A-I      intronic
chr8:93054307(-) A-I      intronic
chr8:93054297(-) A-I      intronic
chr8:93053050(-) A-I      intronic
chr8:93043914(-) A-I      intronic
chr8:93043901(-) A-I      intronic
chr8:93054748(-) A-I      intronic
chr8:93008490(-) A-I      intronic
chr8:93007903(-) A-I      intronic
chr8:93007899(-) A-I      intronic
chr8:93007896(-) A-I      intronic
chr8:92995440(-) A-I      intronic
chr8:93053789(-) A-I      intronic
chr8:93053803(-) A-I      intronic
chr8:92994281(-) A-I      intronic
chr8:92993910(-) A-I      intronic
chr8:93007958(-) A-I      intronic
chr8:93067785(-) A-I      intronic
chr8:93043784(-) A-I      intronic
chr8:93067781(-) A-I      intronic
chr8:93057274(-) A-I      intronic
chr8:93054801(-) A-I      intronic
chr8:92993711(-) A-I      intronic
chr8:92994228(-) A-I      intronic
chr8:92993775(-) A-I      intronic
chr8:92993064(-) A-I      intronic
chr8:93044103(-) A-I      intronic
chr8:93058665(-) A-I      intronic
chr8:93008701(-) A-I      intronic
chr8:92994419(-) A-I      intronic
chr8:92995293(-) A-I      intronic
chr8:92993915(-) A-I      intronic
chr8:93043861(-) A-I      intronic
chr8:92993076(-) A-I      intronic
chr8:92994229(-) A-I      intronic
chr8:93086201(-) A-I      intronic
chr8:93049857(-) A-I      intronic
chr8:93044075(-) A-I      intronic
chr8:92994331(-) A-I      intronic
chr8:92993804(-) A-I      intronic
chr8:92994307(-) A-I      intronic
chr8:92993016(-) A-I      intronic
chr8:93051502(-) A-I      intronic
chr8:93058694(-) A-I      intronic
chr8:92994222(-) A-I      intronic
chr8:93008702(-) A-I      intronic
chr8:92995185(-) A-I      intronic
chr8:93045943(-) A-I      intronic
chr8:93054254(-) A-I      intronic
chr8:93054323(-) A-I      intronic
chr8:93050324(-) A-I      intronic
chr8:93054330(-) A-I      intronic
chr8:93043916(-) A-I      intronic
chr8:93045843(-) A-I      intronic
chr8:92993695(-) A-I      intronic
chr8:93054224(-) A-I      intronic
chr8:92992982(-) A-I      intronic
chr8:93044085(-) A-I      intronic
chr8:93058764(-) A-I      intronic
chr8:93050416(-) A-I      intronic
chr8:93049824(-) A-I      intronic
chr8:93053712(-) A-I      intronic
chr8:93067808(-) A-I      intronic
chr8:93051510(-) A-I      intronic
chr8:93043799(-) A-I      intronic
chr8:92993821(-) A-I      intronic
chr8:93053913(-) A-I      intronic
chr8:93054710(-) A-I      intronic
chr8:92994421(-) A-I      intronic
chr8:93057241(-) A-I      intronic
chr8:93053848(-) A-I      intronic
chr8:93050418(-) A-I      intronic
chr8:92993032(-) A-I      intronic
chr8:92994418(-) A-I      intronic
chr8:93003055(-) A-I      intronic
chr8:93043835(-) A-I      intronic
chr8:93043925(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase RUNX1T1
chr8:92971883-92971884(-) m6A 3'UTR       24981863//22575960//22608085
chr8:92971925-92971926(-) m6A 3'UTR       24981863//22575960//22608085
chr8:92971934-92971935(-) m6A 3'UTR       24981863//22575960//22608085
chr8:92971979-92971980(-) m6A 3'UTR       24981863//22608085
chr8:92972014-92972015(-) m6A 3'UTR       24981863//22608085
chr8:92972111-92972112(-) m6A 3'UTR       24981863//22608085
chr8:92972118-92972119(-) m6A 3'UTR       24981863//22608085
chr8:92972151-92972152(-) m6A 3'UTR       24981863//22608085
chr8:92972232-92972233(-) m6A 3'UTR       24981863//22608085
chr8:92972299-92972300(-) m6A 3'UTR       24981863//22608085
chr8:92972328-92972329(-) m6A 3'UTR       24981863//22608085
chr8:92972421-92972422(-) m6A 3'UTR       25456834//24981863//22608085
chr8:92972440-92972441(-) m6A 3'UTR       25456834//24981863//22608085
chr8:92972455-92972456(-) m6A 3'UTR       25456834//24981863//27773536//22575960//22608085
chr8:92972462-92972463(-) m6A 3'UTR       25456834//24981863//27773536//22575960//22608085
chr8:92972483-92972484(-) m6A CDS//exon       25456834//24981863//27773536//22575960//22608085
chr8:92972501-92972502(-) m6A CDS//exon       25456834//24981863//27773536//22575960//22608085
chr8:92972542-92972543(-) m6A CDS//exon       25456834//24981863//27773536//22575960//22608085
chr8:92972599-92972600(-) m6A CDS//exon       25456834//24981863//27773536//22575960//22608085
chr8:92972628-92972629(-) m6A CDS//exon       25456834//24981863//27773536//22575960//22608085
chr8:92972656-92972657(-) m6A CDS//exon       25456834//24981863//27773536//22575960//22608085
chr8:92972711-92972712(-) m6A 3'UTR//CDS//exon       25456834//24981863//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hcmv-miR-UL36-5p
Exosome Jurkat-derived T cell line (J77cl20)     21505438
RUNX1T1
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL36-5p
Interactor2: RUNX1T1

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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