Basic Information:

  VIRBase ID:  

VHID00220757

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL22A-3p:  MIMAT0001575          SLC6A17:  NM_001010898     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL22A-3p	SLC6A17
miRBase Accession/Entrez ID	MIMAT0001575	388662
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MRT48//NTT4

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SLC6A17	chr1:110722449(+) A-I      intronic chr1:110717228(+) A-I      intronic chr1:110722305(+) A-I      intronic chr1:110717185(+) A-I      intronic chr1:110722315(+) A-I      intronic chr1:110693190(+) A-I      5'UTR chr1:110722615(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SLC6A17	chr1:110709561-110709562(+) m6A CDS       24981863 chr1:110709645-110709646(+) m6A CDS       24981863//22575960 chr1:110709726-110709727(+) m6A CDS       24981863 chr1:110709741-110709742(+) m6A CDS       24981863 chr1:110740994-110740995(+) m6A CDS       24981863 chr1:110741280-110741281(+) m6A 3'UTR       24981863 chr1:110742281-110742282(+) m6A 3'UTR       24981863 chr1:110742677-110742678(+) m6A 3'UTR       24981863 chr1:110742700-110742701(+) m6A 3'UTR       24981863 chr1:110742752-110742753(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SLC6A17	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL22A-3p
Interactor2: SLC6A17

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg