Basic Information:

  VIRBase ID:  

VHID00220743

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL22A-3p:  MIMAT0001575          AMIGO3:  NM_198722     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL22A-3p	AMIGO3
miRBase Accession/Entrez ID	MIMAT0001575	386724
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ALI3//AMIGO-3

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	AMIGO3	chr3:49754323-49754324(-) m6A 3'UTR       - chr3:49754504-49754505(-) m6A 3'UTR       24284625//24209618//25456834//24981863 chr3:49754602-49754603(-) m6A 3'UTR       24284625//25456834//24981863//22608085 chr3:49754803-49754804(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr3:49754829-49754830(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr3:49754842-49754843(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr3:49754969-49754970(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr3:49755010-49755011(-) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr3:49755082-49755083(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr3:49755118-49755119(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr3:49755169-49755170(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr3:49755217-49755218(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr3:49755248-49755249(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr3:49755310-49755311(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr3:49755382-49755383(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr3:49755634-49755635(-) m6A CDS       24284625//24981863 chr3:49755854-49755855(-) m6A CDS       24284625//25456834//24981863//22575960 chr3:49756083-49756084(-) m6A CDS       24981863 chr3:49756310-49756311(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr3:49756332-49756333(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr3:49756394-49756395(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr3:49756610-49756611(-) m6A CDS       24209618//24981863//22608085 chr3:49756620-49756621(-) m6A CDS       24209618//24981863//22608085 chr3:49756704-49756705(-) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr3:49756833-49756834(-) m6A CDS       24284625//24209618//24981863//27371828//22608085 chr3:49756873-49756874(-) m6A CDS       24284625//24209618//24981863//27371828//22608085 chr3:49756946-49756947(-) m6A 5'UTR       24284625//24209618//24981863//27371828//22608085 chr3:49757022-49757023(-) m6A 5'UTR       24284625//24209618//24981863//27371828//22608085 chr3:49757053-49757054(-) m6A 5'UTR       24284625//24209618//24981863//27371828//22608085 chr3:49757125-49757126(-) m6A 5'UTR       24284625//24981863//27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	AMIGO3	Chromatin K562 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL22A-3p
Interactor2: AMIGO3

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg