Detail Information

Basic Information:


  VIRBase ID:  

VHID00220620

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL22A-3p:           RICTOR:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL22A-3p RICTOR
miRBase
Accession/Entrez ID		 MIMAT0001575 253260
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - AVO3//hAVO3//PIA

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR RICTOR
chr5:38979325(-) A-I      intronic
chr5:38980800(-) A-I      intronic
chr5:38979324(-) A-I      intronic
chr5:38969246(-) A-I      intronic
chr5:38969241(-) A-I      intronic
chr5:38969240(-) A-I      intronic
chr5:38969213(-) A-I      intronic
chr5:38969210(-) A-I      intronic
chr5:39051851(-) A-I      intronic
chr5:39056230(-) A-I      intronic
chr5:38968731(-) A-I      intronic
chr5:38968712(-) A-I      intronic
chr5:38968625(-) A-I      intronic
chr5:38968700(-) A-I      intronic
chr5:38980902(-) A-I      intronic
chr5:39051744(-) A-I      intronic
chr5:38983980(-) A-I      intronic
chr5:38979349(-) A-I      intronic
chr5:38968657(-) A-I      intronic
chr5:38980808(-) A-I      intronic
chr5:38968629(-) A-I      intronic
chr5:38979335(-) A-I      intronic
chr5:38983955(-) A-I      intronic
chr5:39069745(-) A-I      intronic
chr5:38983821(-) A-I      intronic
chr5:38983809(-) A-I      intronic
chr5:38980915(-) A-I      intronic
chr5:38969243(-) A-I      intronic
chr5:38980886(-) A-I      intronic
chr5:38968757(-) A-I      intronic
chr5:38968628(-) A-I      intronic
chr5:38985142(-) A-I      intronic
chr5:38968718(-) A-I      intronic
chr5:38984021(-) A-I      intronic
chr5:38968796(-) A-I      intronic
chr5:38969169(-) A-I      intronic
chr5:38983985(-) A-I      intronic
chr5:38969177(-) A-I      intronic
chr5:38968685(-) A-I      intronic
chr5:38968728(-) A-I      intronic
chr5:39052258(-) A-I      intronic
chr5:38968809(-) A-I      intronic
chr5:38998866(-) A-I      intronic
chr5:39050603(-) A-I      intronic
chr5:38983945(-) A-I      intronic
chr5:38985993(-) A-I      intronic
chr5:38968839(-) A-I      intronic
chr5:38968643(-) A-I      intronic
chr5:38985027(-) A-I      intronic
chr5:38984004(-) A-I      intronic
chr5:38986044(-) A-I      intronic
chr5:38969248(-) A-I      intronic
chr5:38985977(-) A-I      intronic
chr5:38984042(-) A-I      intronic
chr5:38942628(-) A-I      intronic
chr5:38969197(-) A-I      intronic
chr5:38979368(-) A-I      intronic
chr5:38985935(-) A-I      intronic
chr5:38968684(-) A-I      intronic
chr5:38968649(-) A-I      intronic
chr5:38983831(-) A-I      intronic
chr5:38984053(-) A-I      intronic
chr5:38980934(-) A-I      intronic
chr5:38985104(-) A-I      intronic
chr5:38985074(-) A-I      intronic
chr5:38968674(-) A-I      intronic
chr5:38968696(-) A-I      intronic
chr5:38968758(-) A-I      intronic
chr5:38968716(-) A-I      intronic
chr5:38968771(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED RICTOR
chr5:38969903(-) A-I intron -    15342557
chr5:38969964(-) A-I intron -    15342557
chr5:38971571(-) A-I intron -    15342557
chr5:38971572(-) A-I intron -    15342557
chr5:38971596(-) A-I intron -    15342557
chr5:38971599(-) A-I intron -    15342557
chr5:38971612(-) A-I intron -    15342557
chr5:38971648(-) A-I intron -    15342557
chr5:38971703(-) A-I intron -    15342557
chr5:38968628(-) A-I intron -    21960545
chr5:38980886(-) A-I intron -    21960545
chr5:38968628(-) A-G intron -    22484847
chr5:38968643(-) A-G intron -    22484847
chr5:38968649(-) A-G intron -    22484847
chr5:38968684(-) A-G intron -    22484847
chr5:38968696(-) A-G intron -    22484847
chr5:38968716(-) A-G intron -    22484847
chr5:38968718(-) A-G intron -    22484847
chr5:38968724(-) A-G intron -    22484847
chr5:38968728(-) A-G intron -    22484847
chr5:38968788(-) A-G intron -    22484847
chr5:38968796(-) A-G intron -    22484847
chr5:38968809(-) A-G intron -    22484847
chr5:38969909(-) A-G intron -    22484847
chr5:38969964(-) A-G intron -    22484847
chr5:38969971(-) A-G intron -    22484847
chr5:38977718(-) C-A intron -    22484847
chr5:38979344(-) A-G intron -    22484847
chr5:38980886(-) A-G intron -    22484847
chr5:38980934(-) A-G intron -    22484847
chr5:38983831(-) A-G intron -    22484847
chr5:38983967(-) A-G intron -    22484847
chr5:38983985(-) A-G intron -    22484847
chr5:38984053(-) A-G intron -    22484847
chr5:38985935(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase RICTOR
chr5:38940438-38940439(-) m6A 3'UTR       27773535
chr5:38940451-38940452(-) m6A 3'UTR       27773535
chr5:38941714-38941715(-) m6A 3'UTR       27773535
chr5:38941781-38941782(-) m6A 3'UTR       24284625//27773535
chr5:38941808-38941809(-) m6A 3'UTR       24284625//27773535//22608085
chr5:38941899-38941900(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr5:38942075-38942076(-) m6A 3'UTR       24284625//27773535//22608085
chr5:38942232-38942233(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085
chr5:38942254-38942255(-) m6A 3'UTR       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr5:38942263-38942264(-) m6A 3'UTR       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr5:38942308-38942309(-) m6A 3'UTR       24284625//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr5:38949944-38949945(-) m6A 3'UTR//CDS       27773535
chr5:38950153-38950154(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr5:38950162-38950163(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr5:38950197-38950198(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr5:38950203-38950204(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr5:38950231-38950232(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr5:38950281-38950282(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr5:38950437-38950438(-) m6A 3'UTR//CDS       24284625//24209618//24981863//28052920//27773535//22575960//22608085
chr5:38950468-38950469(-) m6A 3'UTR//CDS       24284625//24209618//24981863//28052920//27773535//22575960//22608085
chr5:38950483-38950484(-) m6A 3'UTR//CDS       24284625//24209618//24981863//28052920//27773535//22575960//22608085
chr5:38950552-38950553(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22575960//22608085
chr5:38950573-38950574(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22575960//22608085
chr5:38950625-38950626(-) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085
chr5:38950673-38950674(-) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085
chr5:38950718-38950719(-) m6A 3'UTR//CDS       24981863//27773535//22608085
chr5:38952328-38952329(-) m6A 3'UTR//CDS       24981863
chr5:38981022-38981023(-) m6A exon//intron       27773535
chr5:38981085-38981086(-) m6A exon//intron       27773535
chr5:39074444-39074445(-) m6A CDS//exon       24981863
chr5:39074488-39074489(-) m6A 5'UTR//exon       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate RICTOR
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL22A-3p
Interactor2: RICTOR

Evidence Support:


Prediction-Evidence miRanda//PITA//Targetscan
Support Database VmiReg

Starting a new search, please wait ...