Basic Information:

  VIRBase ID:  

VHID00220558

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL22A-3p:  MIMAT0001575          ZNF169:  NM_003448     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL22A-3p	ZNF169
miRBase Accession/Entrez ID	MIMAT0001575	169841
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNF169	chr9:97040036(+) A-I      intronic chr9:97041909(+) A-I      intronic chr9:97049853(+) A-I      intronic chr9:97049898(+) A-I      intronic chr9:97060898(+) A-I      intronic chr9:97027719(+) A-I      intronic chr9:97033481(+) A-I      intronic chr9:97027731(+) A-I      intronic chr9:97027741(+) A-I      intronic chr9:97060923(+) A-I      intronic chr9:97060899(+) A-I      intronic chr9:97029246(+) A-I      intronic chr9:97029255(+) A-I      intronic chr9:97029265(+) A-I      intronic chr9:97038141(+) A-I      intronic chr9:97029270(+) A-I      intronic chr9:97030860(+) A-I      intronic chr9:97033426(+) A-I      intronic chr9:97033429(+) A-I      intronic chr9:97033779(+) A-I      intronic chr9:97038157(+) A-I      intronic chr9:97038221(+) A-I      intronic chr9:97038228(+) A-I      intronic chr9:97027686(+) A-I      intronic chr9:97027706(+) A-I      intronic chr9:97040035(+) A-I      intronic chr9:97027710(+) A-I      intronic chr9:97027715(+) A-I      intronic chr9:97038648(+) A-I      intronic chr9:97025905(+) A-I      intronic chr9:97033517(+) A-I      intronic chr9:97033837(+) A-I      intronic chr9:97033457(+) A-I      intronic chr9:97033881(+) A-I      intronic chr9:97033749(+) A-I      intronic chr9:97029330(+) A-I      intronic chr9:97033843(+) A-I      intronic chr9:97051425(+) A-I      intronic chr9:97030816(+) A-I      intronic chr9:97026438(+) A-I      intronic chr9:97059218(+) A-I      3'UTR chr9:97059142(+) A-I      3'UTR chr9:97059209(+) A-I      3'UTR chr9:97033562(+) A-I      intronic chr9:97033904(+) A-I      intronic chr9:97046370(+) A-I      intronic chr9:97033844(+) A-I      intronic chr9:97038164(+) A-I      intronic chr9:97037501(+) A-I      intronic chr9:97037372(+) A-I      intronic chr9:97041418(+) A-I      intronic chr9:97033826(+) A-I      intronic chr9:97027685(+) A-I      intronic chr9:97029320(+) A-I      intronic chr9:97051426(+) A-I      intronic chr9:97030971(+) A-I      intronic chr9:97027742(+) A-I      intronic chr9:97033464(+) A-I      intronic chr9:97041829(+) A-I      intronic chr9:97037364(+) A-I      intronic chr9:97033784(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ZNF169	chr9:97055760(+) A-I intron -    15342557   //15258596 chr9:97055839(+) A-I intron -    15342557   //15258596 chr9:97055865(+) A-I intron -    15342557   //15258596 chr9:97055883(+) A-I intron -    15258596 chr9:97055900(+) A-I intron -    15342557   //15258596 chr9:97055905(+) A-I intron -    15342557   //15258596 chr9:97055941(+) A-I intron -    15342557   //15258596 chr9:97055964(+) A-I intron -    15342557   //15258596 chr9:97056460(+) A-I intron -    15342557   //15258596 chr9:97056472(+) A-I intron -    15342557   //15258596 chr9:97056502(+) A-I intron -    15342557   //15258596 chr9:97056536(+) A-I intron -    15342557   //15258596 chr9:97056542(+) A-I intron -    15342557   //15258596 chr9:97056543(+) A-I intron -    15342557   //15258596 chr9:97056597(+) A-I intron -    15342557   //15258596 chr9:97056609(+) A-I intron -    15342557   //15258596 chr9:97057390(+) A-I intron -    15342557 chr9:97057414(+) A-I intron -    15342557 chr9:97057426(+) A-I intron -    15342557 chr9:97057431(+) A-I intron -    15342557 chr9:97057432(+) A-I intron -    15342557 chr9:97057552(+) A-I intron -    15342557   //15258596 chr9:97057567(+) A-I intron -    15342557   //15258596 chr9:97059116(+) A-I intron -    15342557 chr9:97059142(+) A-I intron -    15342557 chr9:97059144(+) A-I intron -    15342557 chr9:97059175(+) A-I intron -    15342557 chr9:97059208(+) A-I intron -    15342557 chr9:97059218(+) A-I intron -    15342557 chr9:97055839(+) A-G intron -    21725310   //22484847 chr9:97055905(+) A-G intron -    21725310   //22484847 chr9:97056600(+) A-G intron -    21725310 chr9:97055900(+) A-G intron -    22484847 chr9:97055937(+) A-G intron -    22484847 chr9:97056536(+) A-G intron -    22484847 chr9:97057426(+) A-G intron -    22484847 chr9:97057552(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF169	chr9:97062163-97062164(+) m6A 3'UTR//CDS       22608085 chr9:97062275-97062276(+) m6A 3'UTR//CDS       24284625//24209618//22608085 chr9:97062326-97062327(+) m6A 3'UTR//CDS       24284625//24209618//22608085 chr9:97062375-97062376(+) m6A 3'UTR//CDS       24284625//25456834//22608085 chr9:97062389-97062390(+) m6A 3'UTR//CDS       24284625//25456834//22608085 chr9:97062432-97062433(+) m6A 3'UTR//CDS       24284625//25456834//22608085 chr9:97062453-97062454(+) m6A 3'UTR//CDS       24284625//25456834//22608085 chr9:97062486-97062487(+) m6A 3'UTR//CDS       24284625//25456834//24981863//22608085 chr9:97062493-97062494(+) m6A 3'UTR//CDS       24284625//25456834//24981863//22608085 chr9:97062499-97062500(+) m6A 3'UTR//CDS       24284625//25456834//24981863//22608085 chr9:97062582-97062583(+) m6A 3'UTR//CDS       24284625//25456834//22608085 chr9:97062602-97062603(+) m6A 3'UTR//CDS       24284625//25456834//22608085 chr9:97063106-97063107(+) m6A 3'UTR//CDS       24284625//25456834//22608085 chr9:97063180-97063181(+) m6A 3'UTR//CDS       24284625//25456834//22608085 chr9:97063190-97063191(+) m6A 3'UTR//CDS       24284625//25456834//22608085 chr9:97063264-97063265(+) m6A 3'UTR//CDS       24284625//25456834//24981863//22575960//22608085 chr9:97063274-97063275(+) m6A 3'UTR//CDS       24284625//25456834//24981863//22575960//22608085 chr9:97063358-97063359(+) m6A 3'UTR//CDS       24284625//25456834//24981863//22575960//22608085 chr9:97063386-97063387(+) m6A 3'UTR//CDS       24284625//25456834//24981863//22575960//22608085 chr9:97063399-97063400(+) m6A 3'UTR//CDS       24284625//25456834//24981863//22575960//22608085 chr9:97063405-97063406(+) m6A 3'UTR//CDS       24284625//25456834//24981863//22575960//22608085 chr9:97063442-97063443(+) m6A 3'UTR//CDS       24284625//25456834//24981863//22575960//22608085 chr9:97063526-97063527(+) m6A 3'UTR//CDS       24284625//25456834//22608085 chr9:97063600-97063601(+) m6A 3'UTR//CDS       24284625//25456834//22608085 chr9:97063610-97063611(+) m6A 3'UTR//CDS       24284625//25456834//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF169	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)|K562 cells     - Membrane K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL22A-3p
Interactor2: ZNF169

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg